SMTL ID : 7ok5.1

Crystal structure of mouse neurofascin 155 immunoglobulin domains

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.97 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- BMA- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN-MAN.1: 12 residues within 4Å: Chain A: N.50, S.51, E.87, Q.89, R.103, N.398, S.400, N.401, E.402, H.403, Y.405, L.407 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.402, A:E.87 NAG-NAG-BMA-MAN-MAN-MAN-MAN.4: 12 residues within 4Å: Chain B: N.50, E.87, Q.89, R.103, R.105, N.398, S.400, E.402, H.403, G.404, Y.405, L.407 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.105, B:E.402, B:E.87

1 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN.2: 7 residues within 4Å: Chain A: N.435, T.543, S.584, T.585, E.586, L.587, D.588 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.543, A:S.584, A:T.585, A:T.585

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.3: 7 residues within 4Å: Chain A: R.436, R.438, D.440, Y.470, N.472, S.474, E.476 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.436, A:R.436, A:R.438 NAG-NAG-BMA.6: 7 residues within 4Å: Chain B: R.436, R.438, D.440, Y.470, N.472, S.474, E.476 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.436, B:R.436, B:R.438

1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN.5: 9 residues within 4Å: Chain B: I.432, N.435, T.543, M.582, S.584, T.585, L.587, D.588, Q.589 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.589

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chataigner, L.M.P. et al., Structural insights into the contactin 1 - neurofascin 155 adhesion complex. Nat Commun (2022)

Release Date

2022-12-14

Peptides

Neurofascin 155: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Neurofascin 155

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