SMTL ID : 7onx.1

Crystal structure of PBP3 from P. aeruginosa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: H.356, R.357, K.358 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.356, A:R.357, A:K.358 GOL.2: 5 residues within 4Å: Chain A: I.287, Y.290, I.292, T.366, Y.369 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.369 GOL.3: 4 residues within 4Å: Chain A: T.180, L.181, A.182, R.400 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.182, A:R.400 Water bridges: A:T.399 GOL.4: 5 residues within 4Å: Chain A: E.253, N.352, P.354, G.372, L.373 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.253, A:E.253, A:N.352

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.5: 8 residues within 4Å: Chain A: S.256, K.259, V.295, S.311, Y.371, S.447, G.448, T.449 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:S.256, A:S.256, A:S.311, A:S.311, A:Y.371, A:S.447, A:T.449, A:T.449, A:T.449 Water bridges: A:V.295, A:Y.371

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Freischem, S. et al., Interaction Mode of the Novel Monobactam AIC499 Targeting Penicillin Binding Protein 3 of Gram-Negative Bacteria. Biomolecules (2021)

Release Date

2021-08-04

Peptides

Peptidoglycan D,D-transpeptidase FtsI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidoglycan D,D-transpeptidase FtsI

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