SMTL ID : 7op1.1

Cryo-EM structure of P5B-ATPase E2PiAlF/SPM

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: D.680, G.683, D.1095 Ligands: ALF.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.680, A:D.1095

1 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)

ALF.2: 10 residues within 4Å: Chain A: G.503, D.680, T.682, G.683, T.957, K.1076, D.1095, N.1098, D.1099 Ligands: MG.1 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.680, A:D.680

1 x SPM: SPERMINE(Non-covalent)

SPM.3: 9 residues within 4Å: Chain A: W.407, D.410, E.411, Y.412, I.634, Q.1161, D.1177, F.1180, D.1184 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.407, A:Y.412, A:I.634, A:D.1177 Hydrogen bonds: A:E.411, A:D.1184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, P. et al., Structure and transport mechanism of P5B-ATPases. Nat Commun (2021)

Release Date

2021-06-30

Peptides

Cation-transporting ATPase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Cation-transporting ATPase