SMTL ID : 7oqz.1

Cryo-EM structure of human TMEM45A

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

16 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)

PC1.1: 11 residues within 4Å: Chain A: Q.153, V.156, F.160, L.161, L.164 Chain D: Y.138, F.160 Ligands: PC1.3, PC1.6, PC1.13, PC1.15 Ligand excluded by PLIP PC1.2: 10 residues within 4Å: Chain A: F.194, Q.195, F.198, A.208, W.209, F.219, C.223, H.227, V.230 Chain D: G.84 Ligand excluded by PLIP PC1.3: 11 residues within 4Å: Chain A: N.128, F.131, F.167 Chain B: L.161, V.165, F.224, Y.228 Ligands: PC1.1, PC1.6, PC1.8, PC1.13 Ligand excluded by PLIP PC1.4: 4 residues within 4Å: Chain A: V.235 Chain D: L.110, L.121, N.128 Ligand excluded by PLIP PC1.5: 4 residues within 4Å: Chain A: L.110, L.121, N.128 Chain B: V.235 Ligand excluded by PLIP PC1.6: 12 residues within 4Å: Chain A: Y.138, F.160 Chain B: Q.153, V.156, F.160, L.161, L.164 Chain C: L.157 Ligands: PC1.1, PC1.3, PC1.8, PC1.10 Ligand excluded by PLIP PC1.7: 9 residues within 4Å: Chain B: F.194, Q.195, F.198, A.208, W.209, F.219, C.223, H.227, V.230 Ligand excluded by PLIP PC1.8: 10 residues within 4Å: Chain B: N.128, F.131, F.167 Chain C: L.161, V.165, F.224, Y.228 Ligands: PC1.3, PC1.6, PC1.10 Ligand excluded by PLIP PC1.9: 4 residues within 4Å: Chain B: L.110, L.121, N.128 Chain C: V.235 Ligand excluded by PLIP PC1.10: 11 residues within 4Å: Chain B: Y.138, F.160 Chain C: Q.153, V.156, F.160, L.161, L.164 Ligands: PC1.6, PC1.8, PC1.12, PC1.15 Ligand excluded by PLIP PC1.11: 10 residues within 4Å: Chain B: G.84 Chain C: F.194, Q.195, F.198, A.208, W.209, F.219, C.223, H.227, V.230 Ligand excluded by PLIP PC1.12: 10 residues within 4Å: Chain C: N.128, F.131, F.167 Chain D: L.161, V.165, F.224, Y.228 Ligands: PC1.10, PC1.13, PC1.15 Ligand excluded by PLIP PC1.13: 11 residues within 4Å: Chain A: L.161, V.165, F.224, Y.228 Chain D: N.128, F.131, F.167 Ligands: PC1.1, PC1.3, PC1.12, PC1.15 Ligand excluded by PLIP PC1.14: 3 residues within 4Å: Chain C: L.110, L.121, N.128 Ligand excluded by PLIP PC1.15: 11 residues within 4Å: Chain C: Y.138, F.160 Chain D: Q.153, V.156, F.160, L.161, L.164 Ligands: PC1.1, PC1.10, PC1.12, PC1.13 Ligand excluded by PLIP PC1.16: 9 residues within 4Å: Chain D: F.194, Q.195, F.198, A.208, W.209, F.219, C.223, H.227, V.230 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grieben, M. et al., CryoEM structure of human TMEM45A. To Be Published

Release Date

2021-06-16

Peptides

Transmembrane protein 45A: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Transmembrane protein 45A