SMTL ID : 7ord.1

The crystal structure of the domain-swapped dimer of onconase (2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

homo-dimer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 3 residues within 4Å: Chain A: H.98, F.99 Chain B: H.11 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Salt bridges: B:K.10, B:H.11, A:H.98 Hydrogen bonds: A:F.99

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: Q.2, F.7, K.10, H.11 Chain B: H.98, F.99 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:F.99 Salt bridges: B:H.98, A:K.10, A:H.11 Water bridges: A:Q.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gotte, G. et al., The crystal structure of the domain-swapped dimer of onconase highlights some catalytic and antitumor activity features of the enzyme. Int.J.Biol.Macromol. (2021)

Release Date

2021-10-06

Peptides

Protein P-30: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
BBB

Protein P-30

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