SMTL ID : 7os4.1 (1 other biounit)

Crystal structure of mouse CARM1 in complex with histone H3_13-31 K18

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

hetero-4-4-mer

Ligands

4 x QVR: (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[(~{E})-prop-1-enyl]oxolane-3,4-diol(Covalent)

QVR.1: 18 residues within 4Å: Chain A: F.12, Y.24, F.25, Y.28, G.67, G.69, E.89, A.90, S.91, G.115, K.116, V.117, E.118, E.132, E.141, M.143, S.146 Chain C: R.6 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.28 Hydrogen bonds: A:A.90, A:S.91, A:V.117, A:E.118, A:S.146 pi-Stacking: A:F.25 QVR.2: 18 residues within 4Å: Chain B: F.12, Y.24, F.25, Y.28, G.67, G.69, E.89, A.90, S.91, G.115, K.116, V.117, E.118, E.132, E.141, M.143, S.146 Chain D: R.6 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:Y.28 Hydrogen bonds: B:Y.24, B:G.69, B:A.90, B:V.117, B:E.118, B:S.146 pi-Stacking: B:F.25 QVR.3: 18 residues within 4Å: Chain E: F.12, Y.24, F.25, Y.28, G.67, G.69, E.89, A.90, S.91, G.115, K.116, V.117, E.118, E.132, E.141, M.143, S.146 Chain G: R.6 7 PLIP interactions: 7 interactions with chain E Hydrophobic interactions: E:Y.28 Hydrogen bonds: E:A.90, E:S.91, E:V.117, E:E.118, E:S.146 pi-Stacking: E:F.25 QVR.4: 18 residues within 4Å: Chain F: F.12, Y.24, F.25, Y.28, G.67, G.69, E.89, A.90, S.91, G.115, K.116, V.117, E.118, E.132, E.141, M.143, S.146 Chain H: R.6 8 PLIP interactions: 8 interactions with chain F Hydrophobic interactions: F:Y.28 Hydrogen bonds: F:Y.24, F:G.69, F:A.90, F:V.117, F:E.118, F:S.146 pi-Stacking: F:F.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Structural Studies Provide New Insights into the Role of Lysine Acetylation on Substrate Recognition by CARM1 and Inform the Design of Potent Peptidomimetic Inhibitors. Chembiochem (2021)

Release Date

2021-10-27

Peptides

Histone-arginine methyltransferase CARM1: ABEF
Histone H3.1: CDGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E
A

F
B

C
E

D
F

G
E

H
F

Histone-arginine methyltransferase CARM1

Histone H3.1

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