SMTL ID : 7otp.1

DNA-PKcs in complex with ATPgammaS-Mg

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

AGS.1: 16 residues within 4Å: Chain A: S.3731, L.3732, R.3733, L.3751, K.3753, E.3756, Y.3791, I.3803, E.3804, W.3805, L.3806, N.3926, M.3929, D.3941 Ligands: MG.2, MG.3 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.3731, A:L.3732, A:R.3733, A:E.3804, A:L.3806 Salt bridges: A:K.3753, A:K.3753

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: N.3927, D.3941 Ligands: AGS.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.3941 MG.3: 4 residues within 4Å: Chain A: E.3756, D.3941, K.4023 Ligands: AGS.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.3756

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liang, S. et al., Structural insights into inhibitor regulation of the DNA repair protein DNA-PKcs. Nature (2022)

Release Date

2022-01-12

Peptides

DNA-dependent protein kinase catalytic subunit,DNA-PKcs: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA-dependent protein kinase catalytic subunit,DNA-PKcs

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