SMTL ID : 7ovs.1

Heterodimeric murine tRNA-guanine transglycosylase in the presence of Anderson-Evans type (TEW) and Strandberg type polyoxometalate (POM)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.352, C.354, C.357, H.383 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.352, A:C.354, A:C.357, A:H.383 ZN.4: 4 residues within 4Å: Chain B: C.309, C.311, C.314, H.340 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.309, B:C.311, B:C.314, B:H.340

3 x TEW: 6-tungstotellurate(VI)(Non-covalent)

TEW.2: 5 residues within 4Å: Chain A: T.110, S.111, K.112, K.163, R.167 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.111, A:R.167 TEW.3: 2 residues within 4Å: Chain A: S.157, I.158 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.158 TEW.6: 3 residues within 4Å: Chain B: Q.43, H.68, R.277 No protein-ligand interaction detected (PLIP)

1 x 2I2: pentadecaoxodiphosphopentatungstate(Non-covalent)

2I2.5: 5 residues within 4Å: Chain B: S.227, K.228, P.380, A.381, W.382 3 PLIP interactions: 3 interactions with chain B, Hydrogen bonds: B:K.228, B:A.381, B:W.382

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sebastiani, M. et al., Structural and Biochemical Investigation of the Heterodimeric Murine tRNA-Guanine Transglycosylase. Acs Chem.Biol. (2022)

Release Date

2022-06-22

Peptides

Queuine tRNA-ribosyltransferase accessory subunit 2: A
Queuine tRNA-ribosyltransferase catalytic subunit 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Queuine tRNA-ribosyltransferase accessory subunit 2

Queuine tRNA-ribosyltransferase catalytic subunit 1

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