SMTL ID : 7oyg.1

Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.298, C.304, C.309, C.313 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.298, A:C.304, A:C.309, A:C.313 ZN.2: 4 residues within 4Å: Chain A: C.490, H.645, C.648, C.649 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.490, A:H.645, A:C.648, A:C.649 ZN.3: 4 residues within 4Å: Chain F: H.298, C.304, C.309, C.313 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:H.298, F:C.304, F:C.309, F:C.313 ZN.4: 4 residues within 4Å: Chain F: C.490, H.645, C.648, C.649 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:C.490, F:H.645, F:C.648, F:C.649

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jochheim, F.A. et al., The structure of a dimeric form of SARS-CoV-2 polymerase. Communications Biology (2021)

Release Date

2021-08-25

Peptides

SARS-CoV-2 RNA-dependent RNA polymerase (nsp12): AF
SARS-CoV-2 nsp8: BG
SARS-CoV-2 nsp7: CH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

F
D

B
B

G
E

C
C

H
F

SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)

SARS-CoV-2 nsp8

SARS-CoV-2 nsp7

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