SMTL ID : 7oyk.2 (1 other biounit)

DNA-binding domain of CggR in complex with the DNA operator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 1 residues within 4Å: Chain A: E.80 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.80, A:E.80, H2O.1, H2O.1, H2O.1

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: D.19 Chain B: E.59, F.62 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Water bridges: B:E.59, B:E.59 Hydrogen bonds: A:D.19

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 2 residues within 4Å: Chain F: C.15, G.16 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Soltysova, M. et al., Structural insight into DNA recognition by bacterial transcriptional regulators of the SorC/DeoR family. Acta Crystallogr D Struct Biol (2021)

Release Date

2021-11-10

Peptides

Central glycolytic genes regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
DDD

B
CCC

Central glycolytic genes regulator

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