SMTL ID : 7ozc.1

Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT3109_S1_15)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x G6S: 6-O-sulfo-beta-D-galactopyranose(Non-covalent)

G6S.1: 20 residues within 4Å: Chain A: D.42, D.43, T.81, S.82, I.103, K.135, H.137, T.169, D.171, R.172, H.221, H.278, V.279, N.331, D.337, K.360, Y.361, L.516, K.517 Ligands: CA.2 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:S.82, A:S.82, A:D.171, A:R.172, A:R.172, A:D.337, A:K.517, A:K.517, A:K.517 Water bridges: A:Y.361, A:Y.361, A:K.517 Salt bridges: A:K.135, A:H.137, A:R.172, A:H.278, A:K.360

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: D.42, D.43, S.82, D.330, N.331 Ligands: G6S.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.42, A:D.43, A:D.330, A:D.330

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luis, A.S. et al., Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota. Nat.Chem.Biol. (2022)

Release Date

2022-06-29

Peptides

Arylsulfatase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Arylsulfatase A