SMTL ID : 7oze.1 (3 other biounits)

Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT1624-S1_15)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x G6S: 6-O-sulfo-beta-D-galactopyranose(Non-covalent)

G6S.1: 19 residues within 4Å: Chain A: D.37, D.38, T.76, S.77, I.98, K.130, H.132, T.166, D.168, R.169, H.216, H.218, H.275, V.276, N.328, D.334, K.357, Y.358 Ligands: CA.2 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:S.77, A:S.77, A:D.168, A:R.169, A:R.169, A:N.328, A:D.334, A:Y.358 Water bridges: A:H.218 Salt bridges: A:K.130, A:H.132, A:R.169, A:H.275, A:K.357

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 7 residues within 4Å: Chain A: D.37, D.38, S.77, K.130, D.327, N.328 Ligands: G6S.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.37, A:D.38, A:D.327, A:D.327

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luis, A.S. et al., Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota. Nat.Chem.Biol. (2022)

Release Date

2022-06-29

Peptides

Putative secreted sulfatase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Putative secreted sulfatase

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