SMTL ID : 7p0o.1

mitoNEET bound to M1 molecule

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.1: 11 residues within 4Å: Chain A: C.40, R.41, C.42, S.45, C.51, D.52, G.53, A.54, H.55, G.67, P.68 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.40, A:C.42, A:C.51, A:H.55 FES.2: 11 residues within 4Å: Chain B: C.40, R.41, C.42, S.45, C.51, D.52, G.53, A.54, H.55, G.67, P.68 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.40, B:C.42, B:C.51, B:H.55

1 x 49I: 2-benzamido-4-[(2~{R})-1,2,3,4-tetrahydronaphthalen-2-yl]thiophene-3-carboxylic acid(Non-covalent)

49I.3: 8 residues within 4Å: Chain B: K.36, V.38, C.51, D.52, G.53, H.55, I.70, K.72 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:I.70, B:K.72 Salt bridges: B:K.36

1 x 4OY: 2-benzamido-4-[(2~{S})-1,2,3,4-tetrahydronaphthalen-2-yl]thiophene-3-carboxylic acid(Non-covalent)

4OY.4: 8 residues within 4Å: Chain A: K.36, V.38, C.51, H.55, P.68, I.70 Chain B: K.23, V.25 8 PLIP interactions: 4 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:V.38, A:V.38, B:K.23, B:V.25 Hydrogen bonds: A:K.36 Salt bridges: A:H.55, B:K.23 Water bridges: B:K.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marjault, H.B. et al., An anti-diabetic drug targets NEET (CISD) proteins through destabilization of their [2Fe-2S] clusters. Commun Biol (2022)

Release Date

2022-05-25

Peptides

CDGSH iron-sulfur domain-containing protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CDGSH iron-sulfur domain-containing protein 1

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