SMTL ID : 7p1v.1 (3 other biounits)

Apo structure of KDNase from Trichophyton Rubrum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: R.62, R.81, N.85, R.86, D.87, R.390 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.62, A:R.81, A:D.87, A:D.87, A:R.390, A:R.390 Water bridges: A:R.62, A:R.62, A:D.87

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 8 residues within 4Å: Chain A: D.90, I.91, N.92, G.119, T.120, G.121, H.123, W.125 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.90, A:G.119, A:G.121, A:H.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nejatie, A. et al., Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens. Acs Chem.Biol. (2021)

Release Date

2021-10-20

Peptides

Extracellular sialidase/neuraminidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Extracellular sialidase/neuraminidase

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