SMTL ID : 7p2f.1

Green-type copper-nitrite reductase from Sinorhizobium meliloti 2011

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-trimer

Ligands

6 x CU: COPPER (II) ION(Non-covalent)

CU.1: 4 residues within 4Å: Chain A: H.131, C.172, H.181, M.186 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.131, A:C.172, A:H.181 CU.2: 4 residues within 4Å: Chain A: D.134, H.136, H.171 Chain C: H.342 4 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: A:H.136, A:H.171, C:H.342, H2O.2 CU.3: 4 residues within 4Å: Chain B: H.131, C.172, H.181, M.186 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.131, B:C.172, B:H.181 CU.4: 4 residues within 4Å: Chain A: H.342 Chain B: D.134, H.136, H.171 4 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: B:H.136, B:H.171, A:H.342, H2O.5 CU.5: 4 residues within 4Å: Chain C: H.131, C.172, H.181, M.186 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:H.131, C:C.172, C:H.181 CU.6: 4 residues within 4Å: Chain B: H.342 Chain C: D.134, H.136, H.171 4 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C, 1 Ligand-Water interactions Metal complexes: B:H.342, C:H.136, C:H.171, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ramirez, C.S. et al., Copper nitrite reductase from Sinorhizobium meliloti 2011: Crystal structure and interaction with the physiological versus a nonmetabolically related cupredoxin-like mediator. Protein Sci. (2021)

Release Date

2021-10-13

Peptides

Copper-containing nitrite reductase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Copper-containing nitrite reductase