SMTL ID : 7p4k.1

Soluble epoxide hydrolase in complex with FL217

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

2 x 5IV: ~{N}-[[4-(cyclopropylsulfonylamino)-2-(trifluoromethyl)phenyl]methyl]-1-[(3-fluorophenyl)methyl]indole-5-carboxamide(Non-covalent)

5IV.1: 18 residues within 4Å: Chain A: F.49, P.50, D.117, W.118, M.121, P.143, Y.165, Q.166, L.190, M.201, Y.248, D.278, F.279, V.280, L.281, M.285, H.306, W.307 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.248, A:V.280, A:H.306 Hydrogen bonds: A:D.117, A:Y.248, A:F.279, A:V.280 Water bridges: A:H.306 pi-Stacking: A:W.118, A:W.118, A:H.306, A:W.307 Halogen bonds: A:F.49 5IV.2: 18 residues within 4Å: Chain B: F.49, P.50, D.117, W.118, M.121, T.142, P.143, Y.165, Q.166, L.190, Y.248, D.278, F.279, V.280, L.281, M.285, H.306, W.307 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:W.118, B:Y.248, B:V.280, B:H.306 Hydrogen bonds: B:D.117, B:Y.165, B:F.279, B:V.280 pi-Stacking: B:W.118, B:W.118, B:H.306, B:W.307 Halogen bonds: B:F.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lillich, F.F. et al., Structure-Based Design of Dual Partial Peroxisome Proliferator-Activated Receptor gamma Agonists/Soluble Epoxide Hydrolase Inhibitors. J.Med.Chem. (2021)

Release Date

2022-07-06

Peptides

Bifunctional epoxide hydrolase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bifunctional epoxide hydrolase 2

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