SMTL ID : 7p4z.1

Crystal structure of avidin from hen egg white in space group C2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-tetramer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: G.13, N.15, I.32, I.42 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.13 NAG.2: 6 residues within 4Å: Chain B: K.7, G.13, N.15, I.32, I.42, L.121 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:I.42 Hydrogen bonds: B:K.7, B:G.13 NAG.3: 4 residues within 4Å: Chain C: G.13, N.15, I.32, I.42 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:G.13 NAG.4: 6 residues within 4Å: Chain D: K.7, G.13, N.15, I.32, I.42, L.121 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:I.42 Hydrogen bonds: D:K.7, D:G.13

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gorrec, F. et al., The FUSION protein crystallization screen. J.Appl.Crystallogr. (2022)

Release Date

2021-08-25

Peptides

Avidin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Avidin