SMTL ID : 7p5m.1

Cryo-EM structure of human TTYH2 in lipid nanodiscs

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: L.345, Q.348, L.349, N.352 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 5 residues within 4Å: Chain A: D.126, N.129, S.133, T.195, T.199 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 4 residues within 4Å: Chain B: L.345, Q.348, L.349, N.352 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 5 residues within 4Å: Chain B: D.126, N.129, S.133, T.195, T.199 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 2 residues within 4Å: Chain A: T.279, N.283 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:T.279 NAG.6: 3 residues within 4Å: Chain A: N.31, S.32, T.33 No protein-ligand interaction detected (PLIP) NAG.7: 2 residues within 4Å: Chain B: T.279, N.283 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:T.279 NAG.8: 2 residues within 4Å: Chain B: N.31, S.32 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sukalskaia, A. et al., Cryo-EM structures of the TTYH family reveal a novel architecture for lipid interactions. Nat Commun (2021)

Release Date

2021-08-11

Peptides

Protein tweety homolog 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Protein tweety homolog 2

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