- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-6-1-1-mer
- Ligands
- 3 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: T.48, D.92
- Ligands: AGS.1
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:T.48
MG.4: 4 residues within 4Å:- Chain A: R.153
- Chain B: T.48, D.92
- Ligands: AGS.3
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:T.48
MG.6: 4 residues within 4Å:- Chain B: R.153
- Chain C: T.48, D.92
- Ligands: AGS.5
1 PLIP interactions:1 interactions with chain C- Metal complexes: C:T.48
- 3 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.7: 15 residues within 4Å:- Chain D: T.1, L.2, P.4, Y.10, I.11, G.44, L.45, G.46, K.47, T.48, T.49, Y.163, I.171, P.199, R.200
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:L.2, D:Y.10, D:G.44, D:G.46, D:K.47, D:T.48, D:T.48, D:Y.163
ADP.8: 17 residues within 4Å:- Chain E: L.2, R.3, P.4, Y.10, I.11, G.44, L.45, G.46, K.47, T.48, T.49, Y.163, I.171, R.174, P.199, R.200, N.203
14 PLIP interactions:14 interactions with chain E- Hydrogen bonds: E:I.11, E:G.44, E:L.45, E:G.46, E:G.46, E:K.47, E:T.48, E:T.48, E:T.49, E:T.49, E:Y.163, E:Y.163, E:R.174
- Salt bridges: E:R.200
ADP.9: 18 residues within 4Å:- Chain F: L.2, R.3, P.4, Y.10, I.11, P.43, G.44, L.45, G.46, K.47, T.48, T.49, Y.163, I.171, R.174, P.199, R.200, N.203
13 PLIP interactions:13 interactions with chain F- Hydrogen bonds: F:I.11, F:G.44, F:L.45, F:G.46, F:K.47, F:T.48, F:T.48, F:T.49, F:T.49, F:Y.163, F:N.203
- Salt bridges: F:K.47, F:R.200
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wald, J. et al., Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration. Nature (2022)
- Release Date
- 2022-09-14
- Peptides
- Holliday junction ATP-dependent DNA helicase RuvB: ABCDEF
Holliday junction ATP-dependent DNA helicase RuvA: G
Holliday junction ATP-dependent DNA helicase RuvA: H - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
H
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-6-1-1-mer
- Ligands
- 3 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wald, J. et al., Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration. Nature (2022)
- Release Date
- 2022-09-14
- Peptides
- Holliday junction ATP-dependent DNA helicase RuvB: ABCDEF
Holliday junction ATP-dependent DNA helicase RuvA: G
Holliday junction ATP-dependent DNA helicase RuvA: H - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
H