SMTL ID : 7pc9.2 (1 other biounit)

The PDZ domain of SYNJ2BP complexed with the PDZ-binding motif of HTLV1-TAX1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

5 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: G.126, V.127, E.129 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:G.126, A:E.129, A:E.129, H2O.5, H2O.6 CA.2: 3 residues within 4Å: Chain A: K.164, L.167, E.172 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:K.164, A:L.167, A:E.172, H2O.3 CA.3: 6 residues within 4Å: Chain A: M.194, G.196, L.197, G.198, T.199, D.238 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:M.194, A:G.196, A:D.238 CA.4: 4 residues within 4Å: Chain A: G.278, R.281, G.283, E.323 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.278, A:G.283, A:E.323, A:E.323, H2O.7 CA.5: 4 residues within 4Å: Chain A: M.354, G.356, G.358, D.398 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:M.354, A:G.356, A:G.358, A:D.398, A:D.398

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cousido-Siah, A. et al., A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol (2022)

Release Date

2022-04-20

Peptides

Synaptojanin-2-binding protein,Annexin A2: A
Protein Tax-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Synaptojanin-2-binding protein,Annexin A2

Protein Tax-1

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