SMTL ID : 7pcb.1

The PDZ domain of SNX27 fused with ANXA2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

5 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: G.131, V.132, E.134 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:G.131, A:V.132, A:E.134, H2O.7, H2O.9 CA.2: 3 residues within 4Å: Chain A: K.169, L.172, E.177 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:K.169, A:L.172, A:E.177, H2O.3, H2O.9 CA.3: 5 residues within 4Å: Chain A: M.199, G.201, L.202, G.203, D.243 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:M.199, A:G.201, A:G.203, A:D.243, H2O.1 CA.4: 4 residues within 4Å: Chain A: G.283, R.286, G.288, E.328 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:G.283, A:R.286, A:E.328, H2O.5, H2O.7 CA.5: 4 residues within 4Å: Chain A: M.359, G.361, G.363, D.403 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:M.359, A:G.361, A:G.363, A:D.403, A:D.403

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 8 residues within 4Å: Chain A: C.214, S.215, R.216, R.260, V.303, L.340, C.343, K.347 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.215, A:R.260, A:R.260, A:K.347 Water bridges: A:R.216, A:N.218, A:N.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cousido-Siah, A. et al., A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol (2022)

Release Date

2022-04-20

Peptides

Sorting nexin-27,Annexin A2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sorting nexin-27,Annexin A2