SMTL ID : 7pee.2 (1 other biounit)

Crystal structure of extracellular part of human Trop2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.81 Å

Oligo State

homo-dimer

Ligands

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.1: 4 residues within 4Å: Chain A: N.138, H.139, S.140, R.217 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.148, R.153, R.209 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.148, A:R.153, A:R.209

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 1 residues within 4Å: Chain B: N.138 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pavsic, M., Trop2 Forms a Stable Dimer with Significant Structural Differences within the Membrane-Distal Region as Compared to EpCAM. Int J Mol Sci (2021)

Release Date

2021-10-13

Peptides

Tumor-associated calcium signal transducer 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Tumor-associated calcium signal transducer 2

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