SMTL ID : 7pej.2 (1 other biounit)

Crystal structure of Triosephosphate Isomerase from Schizosaccharomyces pombe (SpTIM wt)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

homo-dimer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 8 residues within 4Å: Chain A: N.10, K.12, H.95, E.164, L.229, V.230, G.231 Ligands: SO4.2 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.229 Hydrogen bonds: A:N.10 Salt bridges: A:K.12, A:H.95 ACT.3: 2 residues within 4Å: Chain A: K.56, K.57 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.57 Water bridges: A:D.58

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 10 residues within 4Å: Chain A: K.12, E.164, A.168, I.169, G.170, G.209, S.210, G.231, G.232 Ligands: ACT.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.170, A:S.210, A:G.231, A:G.232 Water bridges: A:G.209, A:V.211, A:A.233, A:A.233 Salt bridges: A:K.12 SO4.5: 3 residues within 4Å: Chain B: S.210, G.231, G.232 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:S.210, B:G.231, B:G.232 Water bridges: B:V.211, B:V.211 Salt bridges: B:K.12

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.4: 3 residues within 4Å: Chain A: N.155, W.156, S.157 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.155, A:W.156, A:S.157, A:S.157, A:S.157, A:S.157 Water bridges: A:Q.154, A:K.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Romero-Romero, S. et al., Crystal structure of Triosephosphate Isomerase from Schizosaccharomyces pombe (SpTIM wt). To Be Published

Release Date

2022-08-24

Peptides

Triosephosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Triosephosphate isomerase

Related Entries With Identical Sequence