SMTL ID : 7pf1.1

UVC treated Human apoferritin

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-24-mer

Ligands

96 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.2: 4 residues within 4Å: Chain A: N.137, K.141 Chain Q: K.69, Q.73 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: H.11, Q.12 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: Q.81, D.82 Chain W: K.85 Ligand excluded by PLIP CL.11: 4 residues within 4Å: Chain A: K.69, Q.73 Chain J: N.137, K.141 Ligand excluded by PLIP CL.14: 4 residues within 4Å: Chain B: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.15: 4 residues within 4Å: Chain B: N.137, K.141 Chain K: K.69, Q.73 Ligand excluded by PLIP CL.16: 2 residues within 4Å: Chain B: H.11, Q.12 Ligand excluded by PLIP CL.17: 3 residues within 4Å: Chain B: Q.81, D.82 Chain V: K.85 Ligand excluded by PLIP CL.25: 4 residues within 4Å: Chain B: K.69, Q.73 Chain R: N.137, K.141 Ligand excluded by PLIP CL.27: 4 residues within 4Å: Chain C: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.28: 4 residues within 4Å: Chain C: N.137, K.141 Chain F: K.69, Q.73 Ligand excluded by PLIP CL.29: 2 residues within 4Å: Chain C: H.11, Q.12 Ligand excluded by PLIP CL.30: 3 residues within 4Å: Chain C: Q.81, D.82 Chain U: K.85 Ligand excluded by PLIP CL.37: 4 residues within 4Å: Chain C: K.69, Q.73 Chain I: N.137, K.141 Ligand excluded by PLIP CL.40: 4 residues within 4Å: Chain D: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.41: 4 residues within 4Å: Chain D: N.137, K.141 Chain L: K.69, Q.73 Ligand excluded by PLIP CL.42: 2 residues within 4Å: Chain D: H.11, Q.12 Ligand excluded by PLIP CL.43: 3 residues within 4Å: Chain D: Q.81, D.82 Chain M: K.85 Ligand excluded by PLIP CL.52: 4 residues within 4Å: Chain D: K.69, Q.73 Chain V: N.137, K.141 Ligand excluded by PLIP CL.53: 4 residues within 4Å: Chain E: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.54: 4 residues within 4Å: Chain E: N.137, K.141 Chain H: K.69, Q.73 Ligand excluded by PLIP CL.55: 2 residues within 4Å: Chain E: H.11, Q.12 Ligand excluded by PLIP CL.56: 3 residues within 4Å: Chain E: Q.81, D.82 Chain J: K.85 Ligand excluded by PLIP CL.65: 4 residues within 4Å: Chain E: K.69, Q.73 Chain S: N.137, K.141 Ligand excluded by PLIP CL.66: 4 residues within 4Å: Chain F: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.67: 4 residues within 4Å: Chain F: N.137, K.141 Chain I: K.69, Q.73 Ligand excluded by PLIP CL.68: 2 residues within 4Å: Chain F: H.11, Q.12 Ligand excluded by PLIP CL.69: 3 residues within 4Å: Chain F: Q.81, D.82 Chain R: K.85 Ligand excluded by PLIP CL.78: 4 residues within 4Å: Chain G: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.79: 4 residues within 4Å: Chain G: N.137, K.141 Chain P: K.69, Q.73 Ligand excluded by PLIP CL.80: 2 residues within 4Å: Chain G: H.11, Q.12 Ligand excluded by PLIP CL.81: 3 residues within 4Å: Chain G: Q.81, D.82 Chain X: K.85 Ligand excluded by PLIP CL.88: 4 residues within 4Å: Chain G: K.69, Q.73 Chain N: N.137, K.141 Ligand excluded by PLIP CL.91: 4 residues within 4Å: Chain H: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.92: 4 residues within 4Å: Chain H: N.137, K.141 Chain S: K.69, Q.73 Ligand excluded by PLIP CL.93: 2 residues within 4Å: Chain H: H.11, Q.12 Ligand excluded by PLIP CL.94: 3 residues within 4Å: Chain H: Q.81, D.82 Chain I: K.85 Ligand excluded by PLIP CL.103: 4 residues within 4Å: Chain I: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.104: 2 residues within 4Å: Chain I: H.11, Q.12 Ligand excluded by PLIP CL.105: 3 residues within 4Å: Chain H: K.85 Chain I: Q.81, D.82 Ligand excluded by PLIP CL.112: 4 residues within 4Å: Chain J: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.113: 2 residues within 4Å: Chain J: H.11, Q.12 Ligand excluded by PLIP CL.114: 3 residues within 4Å: Chain E: K.85 Chain J: Q.81, D.82 Ligand excluded by PLIP CL.121: 4 residues within 4Å: Chain J: K.69, Q.73 Chain Q: N.137, K.141 Ligand excluded by PLIP CL.123: 4 residues within 4Å: Chain K: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.124: 4 residues within 4Å: Chain K: N.137, K.141 Chain R: K.69, Q.73 Ligand excluded by PLIP CL.125: 2 residues within 4Å: Chain K: H.11, Q.12 Ligand excluded by PLIP CL.126: 3 residues within 4Å: Chain K: Q.81, D.82 Chain N: K.85 Ligand excluded by PLIP CL.134: 4 residues within 4Å: Chain L: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.135: 4 residues within 4Å: Chain L: N.137, K.141 Chain V: K.69, Q.73 Ligand excluded by PLIP CL.136: 2 residues within 4Å: Chain L: H.11, Q.12 Ligand excluded by PLIP CL.137: 3 residues within 4Å: Chain L: Q.81, D.82 Chain T: K.85 Ligand excluded by PLIP CL.146: 4 residues within 4Å: Chain M: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.147: 4 residues within 4Å: Chain M: N.137, K.141 Chain U: K.69, Q.73 Ligand excluded by PLIP CL.148: 2 residues within 4Å: Chain M: H.11, Q.12 Ligand excluded by PLIP CL.149: 3 residues within 4Å: Chain D: K.85 Chain M: Q.81, D.82 Ligand excluded by PLIP CL.156: 4 residues within 4Å: Chain M: K.69, Q.73 Chain O: N.137, K.141 Ligand excluded by PLIP CL.158: 4 residues within 4Å: Chain N: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.159: 2 residues within 4Å: Chain N: H.11, Q.12 Ligand excluded by PLIP CL.160: 3 residues within 4Å: Chain K: K.85 Chain N: Q.81, D.82 Ligand excluded by PLIP CL.166: 4 residues within 4Å: Chain N: K.69, Q.73 Chain P: N.137, K.141 Ligand excluded by PLIP CL.168: 4 residues within 4Å: Chain O: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.169: 2 residues within 4Å: Chain O: H.11, Q.12 Ligand excluded by PLIP CL.170: 3 residues within 4Å: Chain O: Q.81, D.82 Chain Q: K.85 Ligand excluded by PLIP CL.177: 4 residues within 4Å: Chain O: K.69, Q.73 Chain U: N.137, K.141 Ligand excluded by PLIP CL.178: 4 residues within 4Å: Chain P: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.179: 2 residues within 4Å: Chain P: H.11, Q.12 Ligand excluded by PLIP CL.180: 3 residues within 4Å: Chain P: Q.81, D.82 Chain S: K.85 Ligand excluded by PLIP CL.188: 4 residues within 4Å: Chain Q: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.189: 2 residues within 4Å: Chain Q: H.11, Q.12 Ligand excluded by PLIP CL.190: 3 residues within 4Å: Chain O: K.85 Chain Q: Q.81, D.82 Ligand excluded by PLIP CL.198: 4 residues within 4Å: Chain R: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.199: 2 residues within 4Å: Chain R: H.11, Q.12 Ligand excluded by PLIP CL.200: 3 residues within 4Å: Chain F: K.85 Chain R: Q.81, D.82 Ligand excluded by PLIP CL.208: 4 residues within 4Å: Chain S: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.209: 2 residues within 4Å: Chain S: H.11, Q.12 Ligand excluded by PLIP CL.210: 3 residues within 4Å: Chain P: K.85 Chain S: Q.81, D.82 Ligand excluded by PLIP CL.217: 4 residues within 4Å: Chain T: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.218: 4 residues within 4Å: Chain T: N.137, K.141 Chain W: K.69, Q.73 Ligand excluded by PLIP CL.219: 2 residues within 4Å: Chain T: H.11, Q.12 Ligand excluded by PLIP CL.220: 3 residues within 4Å: Chain L: K.85 Chain T: Q.81, D.82 Ligand excluded by PLIP CL.226: 4 residues within 4Å: Chain T: K.69, Q.73 Chain X: N.137, K.141 Ligand excluded by PLIP CL.228: 4 residues within 4Å: Chain U: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.229: 2 residues within 4Å: Chain U: H.11, Q.12 Ligand excluded by PLIP CL.230: 3 residues within 4Å: Chain C: K.85 Chain U: Q.81, D.82 Ligand excluded by PLIP CL.237: 4 residues within 4Å: Chain V: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.238: 2 residues within 4Å: Chain V: H.11, Q.12 Ligand excluded by PLIP CL.239: 3 residues within 4Å: Chain B: K.85 Chain V: Q.81, D.82 Ligand excluded by PLIP CL.246: 4 residues within 4Å: Chain W: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.247: 4 residues within 4Å: Chain W: N.137, K.141 Chain X: K.69, Q.73 Ligand excluded by PLIP CL.248: 2 residues within 4Å: Chain W: H.11, Q.12 Ligand excluded by PLIP CL.249: 3 residues within 4Å: Chain A: K.85 Chain W: Q.81, D.82 Ligand excluded by PLIP CL.256: 4 residues within 4Å: Chain X: R.7, Q.8, N.9, Y.10 Ligand excluded by PLIP CL.257: 2 residues within 4Å: Chain X: H.11, Q.12 Ligand excluded by PLIP CL.258: 3 residues within 4Å: Chain G: K.85 Chain X: Q.81, D.82 Ligand excluded by PLIP

167 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.6: 1 residues within 4Å: Chain A: C.100 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.100, H2O.10 MG.7: 3 residues within 4Å: Chain A: D.40 Chain T: K.144, D.148 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.40, H2O.3, H2O.229 MG.8: 2 residues within 4Å: Chain A: Q.56, E.59 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.59, H2O.2, H2O.2, H2O.4 MG.9: 3 residues within 4Å: Chain A: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.25, A:E.60, A:H.63, H2O.1, H2O.2 MG.10: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.12: 3 residues within 4Å: Chain A: K.144, D.148 Chain O: D.40 3 PLIP interactions: 1 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:D.40, H2O.10, H2O.165 MG.13: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.18: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.19: 1 residues within 4Å: Chain B: C.100 2 PLIP interactions: 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:C.100, H2O.22 MG.20: 3 residues within 4Å: Chain B: D.40 Chain L: K.144, D.148 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.40, H2O.15, H2O.137 MG.21: 2 residues within 4Å: Chain B: Q.56, E.59 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.59, H2O.14, H2O.14, H2O.16 MG.22: 3 residues within 4Å: Chain B: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.25, B:E.60, B:H.63, H2O.13, H2O.13 MG.23: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.24: 3 residues within 4Å: Chain B: K.144, D.148 Chain N: D.40 3 PLIP interactions: 1 interactions with chain N, 2 Ligand-Water interactions Metal complexes: N:D.40, H2O.22, H2O.153 MG.26: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.31: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.32: 1 residues within 4Å: Chain C: C.100 2 PLIP interactions: 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:C.100, H2O.33 MG.33: 3 residues within 4Å: Chain C: D.40 Chain M: K.144, D.148 3 PLIP interactions: 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:D.40, H2O.27, H2O.149 MG.34: 2 residues within 4Å: Chain C: Q.56, E.59 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.59, H2O.25, H2O.26, H2O.28 MG.35: 3 residues within 4Å: Chain C: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.25, C:E.60, C:H.63, H2O.25, H2O.25 MG.36: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.38: 3 residues within 4Å: Chain C: K.144, D.148 Chain R: D.40 3 PLIP interactions: 1 interactions with chain R, 2 Ligand-Water interactions Metal complexes: R:D.40, H2O.34, H2O.200 MG.39: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.44: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.45: 1 residues within 4Å: Chain D: C.100 2 PLIP interactions: 1 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:C.100, H2O.45 MG.46: 3 residues within 4Å: Chain D: D.40 Chain O: K.144, D.148 3 PLIP interactions: 1 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:D.40, H2O.38, H2O.172 MG.47: 2 residues within 4Å: Chain D: Q.56, E.59 4 PLIP interactions: 1 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:E.59, H2O.37, H2O.37, H2O.39 MG.48: 3 residues within 4Å: Chain D: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.25, D:E.60, D:H.63, H2O.36, H2O.37 MG.49: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.50: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.51: 3 residues within 4Å: Chain D: K.144, D.148 Chain T: D.40 3 PLIP interactions: 1 interactions with chain T, 2 Ligand-Water interactions Metal complexes: T:D.40, H2O.45, H2O.222 MG.57: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.58: 1 residues within 4Å: Chain E: C.100 2 PLIP interactions: 1 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:C.100, H2O.56 MG.59: 3 residues within 4Å: Chain E: D.40 Chain Q: K.144, D.148 3 PLIP interactions: 1 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:D.40, H2O.50, H2O.195 MG.60: 2 residues within 4Å: Chain E: Q.56, E.59 4 PLIP interactions: 1 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:E.59, H2O.49, H2O.49, H2O.51 MG.61: 3 residues within 4Å: Chain E: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:E.25, E:E.60, E:H.63, H2O.48, H2O.48 MG.62: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.63: 3 residues within 4Å: Chain E: K.144, D.148 Chain I: D.40 3 PLIP interactions: 1 interactions with chain I, 2 Ligand-Water interactions Metal complexes: I:D.40, H2O.57, H2O.95 MG.64: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.70: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.71: 1 residues within 4Å: Chain F: C.100 2 PLIP interactions: 1 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:C.100, H2O.68 MG.72: 3 residues within 4Å: Chain F: D.40 Chain K: K.144, D.148 3 PLIP interactions: 1 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:D.40, H2O.61, H2O.125 MG.73: 2 residues within 4Å: Chain F: Q.56, E.59 4 PLIP interactions: 1 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:E.59, H2O.60, H2O.60, H2O.62 MG.74: 3 residues within 4Å: Chain F: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.25, F:E.60, F:H.63, H2O.59, H2O.59 MG.75: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.76: 3 residues within 4Å: Chain F: K.144, D.148 Chain H: D.40 3 PLIP interactions: 1 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:D.40, H2O.68, H2O.84 MG.77: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.82: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.83: 1 residues within 4Å: Chain G: C.100 2 PLIP interactions: 1 interactions with chain G, 1 Ligand-Water interactions Metal complexes: G:C.100, H2O.79 MG.84: 3 residues within 4Å: Chain G: D.40 Chain W: K.144, D.148 3 PLIP interactions: 1 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:D.40, H2O.72, H2O.264 MG.85: 2 residues within 4Å: Chain G: Q.56, E.59 4 PLIP interactions: 1 interactions with chain G, 3 Ligand-Water interactions Metal complexes: G:E.59, H2O.71, H2O.72, H2O.73 MG.86: 3 residues within 4Å: Chain G: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.25, G:E.60, G:H.63, H2O.71, H2O.71 MG.87: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.89: 3 residues within 4Å: Chain G: K.144, D.148 Chain S: D.40 3 PLIP interactions: 1 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:D.40, H2O.79, H2O.211 MG.90: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.95: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.96: 1 residues within 4Å: Chain H: C.100 2 PLIP interactions: 1 interactions with chain H, 1 Ligand-Water interactions Metal complexes: H:C.100, H2O.90 MG.97: 2 residues within 4Å: Chain H: Q.56, E.59 4 PLIP interactions: 1 interactions with chain H, 3 Ligand-Water interactions Metal complexes: H:E.59, H2O.83, H2O.83, H2O.85 MG.98: 3 residues within 4Å: Chain H: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:E.25, H:E.60, H:H.63, H2O.82, H2O.82 MG.99: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.100: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.101: 3 residues within 4Å: Chain H: K.144, D.148 Chain P: D.40 3 PLIP interactions: 1 interactions with chain P, 2 Ligand-Water interactions Metal complexes: P:D.40, H2O.91, H2O.177 MG.102: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.106: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.107: 1 residues within 4Å: Chain I: C.100 2 PLIP interactions: 1 interactions with chain I, 1 Ligand-Water interactions Metal complexes: I:C.100, H2O.102 MG.108: 2 residues within 4Å: Chain I: Q.56, E.59 4 PLIP interactions: 1 interactions with chain I, 3 Ligand-Water interactions Metal complexes: I:E.59, H2O.94, H2O.94, H2O.96 MG.109: 3 residues within 4Å: Chain I: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain I, 2 Ligand-Water interactions Metal complexes: I:E.25, I:E.60, I:H.63, H2O.93, H2O.94 MG.110: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.111: 3 residues within 4Å: Chain I: K.144, D.148 Chain U: D.40 3 PLIP interactions: 1 interactions with chain U, 2 Ligand-Water interactions Metal complexes: U:D.40, H2O.102, H2O.234 MG.115: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.116: 1 residues within 4Å: Chain J: C.100 2 PLIP interactions: 1 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:C.100, H2O.114 MG.117: 3 residues within 4Å: Chain J: D.40 Chain S: K.144, D.148 3 PLIP interactions: 1 interactions with chain J, 2 Ligand-Water interactions Metal complexes: J:D.40, H2O.107, H2O.218 MG.118: 2 residues within 4Å: Chain J: Q.56, E.59 4 PLIP interactions: 1 interactions with chain J, 3 Ligand-Water interactions Metal complexes: J:E.59, H2O.106, H2O.106, H2O.108 MG.119: 3 residues within 4Å: Chain J: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain J, 2 Ligand-Water interactions Metal complexes: J:E.25, J:E.60, J:H.63, H2O.105, H2O.105 MG.120: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.122: 3 residues within 4Å: Chain J: K.144, D.148 Chain W: D.40 3 PLIP interactions: 1 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:D.40, H2O.114, H2O.257 MG.127: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.128: 1 residues within 4Å: Chain K: C.100 2 PLIP interactions: 1 interactions with chain K, 1 Ligand-Water interactions Metal complexes: K:C.100, H2O.125 MG.129: 3 residues within 4Å: Chain K: D.40 Chain P: K.144, D.148 3 PLIP interactions: 1 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:D.40, H2O.119, H2O.184 MG.130: 2 residues within 4Å: Chain K: Q.56, E.59 4 PLIP interactions: 1 interactions with chain K, 3 Ligand-Water interactions Metal complexes: K:E.59, H2O.117, H2O.118, H2O.120 MG.131: 3 residues within 4Å: Chain K: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:E.25, K:E.60, K:H.63, H2O.117, H2O.117 MG.132: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.133: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.138: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.139: 1 residues within 4Å: Chain L: C.100 2 PLIP interactions: 1 interactions with chain L, 1 Ligand-Water interactions Metal complexes: L:C.100, H2O.137 MG.140: 3 residues within 4Å: Chain L: D.40 Chain X: K.144, D.148 3 PLIP interactions: 1 interactions with chain L, 2 Ligand-Water interactions Metal complexes: L:D.40, H2O.130, H2O.276 MG.141: 2 residues within 4Å: Chain L: Q.56, E.59 4 PLIP interactions: 1 interactions with chain L, 3 Ligand-Water interactions Metal complexes: L:E.59, H2O.129, H2O.129, H2O.131 MG.142: 3 residues within 4Å: Chain L: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain L, 2 Ligand-Water interactions Metal complexes: L:E.25, L:E.60, L:H.63, H2O.128, H2O.128 MG.143: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.144: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.145: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.150: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.151: 1 residues within 4Å: Chain M: C.100 2 PLIP interactions: 1 interactions with chain M, 1 Ligand-Water interactions Metal complexes: M:C.100, H2O.148 MG.152: 3 residues within 4Å: Chain M: D.40 Chain V: K.144, D.148 3 PLIP interactions: 1 interactions with chain M, 2 Ligand-Water interactions Metal complexes: M:D.40, H2O.142, H2O.253 MG.153: 2 residues within 4Å: Chain M: Q.56, E.59 4 PLIP interactions: 1 interactions with chain M, 3 Ligand-Water interactions Metal complexes: M:E.59, H2O.140, H2O.141, H2O.143 MG.154: 3 residues within 4Å: Chain M: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain M, 2 Ligand-Water interactions Metal complexes: M:E.25, M:E.60, M:H.63, H2O.140, H2O.140 MG.155: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.157: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.161: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.162: 1 residues within 4Å: Chain N: C.100 2 PLIP interactions: 1 interactions with chain N, 1 Ligand-Water interactions Metal complexes: N:C.100, H2O.160 MG.163: 2 residues within 4Å: Chain N: Q.56, E.59 4 PLIP interactions: 1 interactions with chain N, 3 Ligand-Water interactions Metal complexes: N:E.59, H2O.152, H2O.152, H2O.154 MG.164: 3 residues within 4Å: Chain N: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain N, 2 Ligand-Water interactions Metal complexes: N:E.25, N:E.60, N:H.63, H2O.151, H2O.152 MG.165: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.167: 3 residues within 4Å: Chain N: K.144, D.148 Chain X: D.40 3 PLIP interactions: 1 interactions with chain X, 2 Ligand-Water interactions Metal complexes: X:D.40, H2O.160, H2O.269 MG.171: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.172: 1 residues within 4Å: Chain O: C.100 2 PLIP interactions: 1 interactions with chain O, 1 Ligand-Water interactions Metal complexes: O:C.100, H2O.172 MG.173: 2 residues within 4Å: Chain O: Q.56, E.59 4 PLIP interactions: 1 interactions with chain O, 3 Ligand-Water interactions Metal complexes: O:E.59, H2O.164, H2O.164, H2O.166 MG.174: 3 residues within 4Å: Chain O: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:E.25, O:E.60, O:H.63, H2O.163, H2O.163 MG.175: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.176: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.181: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.182: 1 residues within 4Å: Chain P: C.100 2 PLIP interactions: 1 interactions with chain P, 1 Ligand-Water interactions Metal complexes: P:C.100, H2O.183 MG.183: 2 residues within 4Å: Chain P: Q.56, E.59 4 PLIP interactions: 1 interactions with chain P, 3 Ligand-Water interactions Metal complexes: P:E.59, H2O.175, H2O.176, H2O.178 MG.184: 3 residues within 4Å: Chain P: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain P, 2 Ligand-Water interactions Metal complexes: P:E.25, P:E.60, P:H.63, H2O.175, H2O.175 MG.185: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.186: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.187: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.191: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.192: 1 residues within 4Å: Chain Q: C.100 2 PLIP interactions: 1 interactions with chain Q, 1 Ligand-Water interactions Metal complexes: Q:C.100, H2O.195 MG.193: 3 residues within 4Å: Chain Q: D.40 Chain U: K.144, D.148 4 PLIP interactions: 1 interactions with chain Q, 3 Ligand-Water interactions Metal complexes: Q:D.40, H2O.188, H2O.235, H2O.241 MG.194: 2 residues within 4Å: Chain Q: Q.56, E.59 4 PLIP interactions: 1 interactions with chain Q, 3 Ligand-Water interactions Metal complexes: Q:E.59, H2O.187, H2O.187, H2O.189 MG.195: 3 residues within 4Å: Chain Q: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain Q, 2 Ligand-Water interactions Metal complexes: Q:E.25, Q:E.60, Q:H.63, H2O.186, H2O.186 MG.196: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.197: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.201: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.202: 1 residues within 4Å: Chain R: C.100 2 PLIP interactions: 1 interactions with chain R, 1 Ligand-Water interactions Metal complexes: R:C.100, H2O.206 MG.203: 2 residues within 4Å: Chain R: Q.56, E.59 4 PLIP interactions: 1 interactions with chain R, 3 Ligand-Water interactions Metal complexes: R:E.59, H2O.199, H2O.199, H2O.201 MG.204: 3 residues within 4Å: Chain R: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain R, 2 Ligand-Water interactions Metal complexes: R:E.25, R:E.60, R:H.63, H2O.198, H2O.198 MG.205: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.206: 3 residues within 4Å: Chain R: K.144, D.148 Chain V: D.40 3 PLIP interactions: 1 interactions with chain V, 2 Ligand-Water interactions Metal complexes: V:D.40, H2O.207, H2O.246 MG.207: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.211: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.212: 1 residues within 4Å: Chain S: C.100 2 PLIP interactions: 1 interactions with chain S, 1 Ligand-Water interactions Metal complexes: S:C.100, H2O.218 MG.213: 2 residues within 4Å: Chain S: Q.56, E.59 4 PLIP interactions: 1 interactions with chain S, 3 Ligand-Water interactions Metal complexes: S:E.59, H2O.210, H2O.210, H2O.212 MG.214: 3 residues within 4Å: Chain S: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:E.25, S:E.60, S:H.63, H2O.209, H2O.209 MG.215: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.216: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.221: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.222: 1 residues within 4Å: Chain T: C.100 2 PLIP interactions: 1 interactions with chain T, 1 Ligand-Water interactions Metal complexes: T:C.100, H2O.229 MG.223: 2 residues within 4Å: Chain T: Q.56, E.59 4 PLIP interactions: 1 interactions with chain T, 3 Ligand-Water interactions Metal complexes: T:E.59, H2O.221, H2O.221, H2O.223 MG.224: 3 residues within 4Å: Chain T: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain T, 2 Ligand-Water interactions Metal complexes: T:E.25, T:E.60, T:H.63, H2O.220, H2O.221 MG.225: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.227: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.231: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.232: 1 residues within 4Å: Chain U: C.100 2 PLIP interactions: 1 interactions with chain U, 1 Ligand-Water interactions Metal complexes: U:C.100, H2O.241 MG.233: 2 residues within 4Å: Chain U: Q.56, E.59 4 PLIP interactions: 1 interactions with chain U, 3 Ligand-Water interactions Metal complexes: U:E.59, H2O.233, H2O.233, H2O.235 MG.234: 3 residues within 4Å: Chain U: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain U, 2 Ligand-Water interactions Metal complexes: U:E.25, U:E.60, U:H.63, H2O.232, H2O.232 MG.235: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.236: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.240: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.241: 1 residues within 4Å: Chain V: C.100 2 PLIP interactions: 1 interactions with chain V, 1 Ligand-Water interactions Metal complexes: V:C.100, H2O.252 MG.242: 2 residues within 4Å: Chain V: Q.56, E.59 4 PLIP interactions: 1 interactions with chain V, 3 Ligand-Water interactions Metal complexes: V:E.59, H2O.244, H2O.245, H2O.247 MG.243: 3 residues within 4Å: Chain V: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain V, 2 Ligand-Water interactions Metal complexes: V:E.25, V:E.60, V:H.63, H2O.244, H2O.244 MG.244: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.245: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.250: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.251: 1 residues within 4Å: Chain W: C.100 2 PLIP interactions: 1 interactions with chain W, 1 Ligand-Water interactions Metal complexes: W:C.100, H2O.264 MG.252: 2 residues within 4Å: Chain W: Q.56, E.59 4 PLIP interactions: 1 interactions with chain W, 3 Ligand-Water interactions Metal complexes: W:E.59, H2O.256, H2O.256, H2O.258 MG.253: 3 residues within 4Å: Chain W: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:E.25, W:E.60, W:H.63, H2O.255, H2O.256 MG.254: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.255: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.259: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.260: 1 residues within 4Å: Chain X: C.100 2 PLIP interactions: 1 interactions with chain X, 1 Ligand-Water interactions Metal complexes: X:C.100, H2O.276 MG.261: 2 residues within 4Å: Chain X: Q.56, E.59 4 PLIP interactions: 1 interactions with chain X, 3 Ligand-Water interactions Metal complexes: X:E.59, H2O.268, H2O.268, H2O.270 MG.262: 3 residues within 4Å: Chain X: E.25, E.60, H.63 5 PLIP interactions: 3 interactions with chain X, 2 Ligand-Water interactions Metal complexes: X:E.25, X:E.60, X:H.63, H2O.267, H2O.267 MG.263: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Depelteau, J.S. et al., UVC inactivation of pathogenic samples suitable for cryo-EM analysis. Commun Biol (2022)

Release Date

2022-01-26

Peptides

Ferritin heavy chain, N-terminally processed: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
M

N
N

O
O

P
P

Q
Q

R
R

S
S

T
T

U
U

V
V

W
W

X
X

Ferritin heavy chain, N-terminally processed