SMTL ID : 7pi3.4 (3 other biounits)

PfCyRPA bound to Fab fragments from monoclonal antibodies Cy.003, Cy.004 and Cy.007

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.27 Å

Oligo State

hetero-1-1-1-1-1-1-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 7 residues within 4Å: Chain A: E.92, K.100 Chain F: D.101, D.102, H.105, D.108 Ligands: CA.2 No protein-ligand interaction detected (PLIP) CA.2: 6 residues within 4Å: Chain F: D.101, H.105, D.108, E.112 Chain G: N.26 Ligands: CA.1 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:D.101, F:D.108, F:E.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ragotte, R.J. et al., Heterotypic interactions drive antibody synergy against a malaria vaccine candidate. Nat Commun (2022)

Release Date

2022-02-09

Peptides

Cysteine-rich protective antigen: A
Monoclonal antibody Cy.003 heavy chain: B
Monoclonal antibody Cy.003 light chain: C
Monoclonal antibody Cy.007 heavy chain: D
Monoclonal antibody Cy.007 light chain: E
Monoclonal antibody Cy.004 heavy chain: F
Monoclonal antibody Cy.004 light chain: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
V

B
W

C
X

D
Y

E
Z

F
a

G
b

Cysteine-rich protective antigen

Monoclonal antibody Cy.003 heavy chain

Monoclonal antibody Cy.003 light chain

Monoclonal antibody Cy.007 heavy chain

Monoclonal antibody Cy.007 light chain

Monoclonal antibody Cy.004 heavy chain

Monoclonal antibody Cy.004 light chain

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