SMTL ID : 7pi6.2 (1 other biounit)

Trypanosoma brucei ISG65 bound to human complement C3d

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: Y.59 Chain B: S.69, S.70, G.108, K.111, W.112, L.115 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:Y.59, B:S.69, B:S.70, B:G.108 GOL.2: 7 residues within 4Å: Chain B: W.83, E.126, P.129, V.130, Q.133, I.136, K.145 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.126, B:V.130, B:Q.133

1 x PG0: 2-(2-METHOXYETHOXY)ETHANOL(Non-functional Binders)

PG0.3: 5 residues within 4Å: Chain B: G.15, A.16, F.65, F.75, V.76 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Macleod, O.J.S. et al., Invariant surface glycoprotein 65 of Trypanosoma brucei is a complement C3 receptor. Nat Commun (2022)

Release Date

2022-07-27

Peptides

65 kDa invariant surface glycoprotein: A
Complement C3dg fragment: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

65 kDa invariant surface glycoprotein

Complement C3dg fragment

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