SMTL ID : 7pkm.1

LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.91, H.250, D.254 Ligands: 6G8.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.91, A:H.250, A:D.254, A:D.254

1 x 6G8: (2S,4S)-N-[(3R,5R)-1-cyclopropylcarbonyl-5-[[[2-methyl-4-[2-[4-(morpholin-4-ylmethyl)phenyl]ethynyl]phenyl]carbonylamino]methyl]pyrrolidin-3-yl]-4-fluoranyl-pyrrolidine-2-carboxamide(Non-covalent)

6G8.2: 20 residues within 4Å: Chain A: L.31, M.75, E.90, H.91, F.173, T.203, F.204, F.206, I.210, L.213, R.214, A.219, G.222, S.223, A.227, V.229, H.250, K.251, D.254 Ligands: ZN.1 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.31, A:L.31, A:F.173, A:T.203, A:F.204, A:F.206, A:I.210, A:I.210, A:I.210, A:L.213, A:A.219, A:A.227, A:V.229 Hydrogen bonds: A:E.90, A:T.203, A:F.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ryan, M.D. et al., LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria. To Be Published

Release Date

2022-09-07

Peptides

UDP-3-O-acyl-N-acetylglucosamine deacetylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-3-O-acyl-N-acetylglucosamine deacetylase

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