SMTL ID : 7plc.2 (3 other biounits)

Caulobacter crescentus xylonolactonase with D-xylose, P21 space group

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x XYP: beta-D-xylopyranose(Non-covalent)

XYP.1: 12 residues within 4Å: Chain A: L.16, E.18, I.32, R.99, N.101, M.116, E.120, N.146, D.196, W.211, K.256 Ligands: FE2.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.99, A:R.99, A:N.101, A:N.101, A:N.146, A:K.256 Water bridges: A:R.99, A:E.120

1 x FE2: FE (II) ION(Non-covalent)

FE2.2: 5 residues within 4Å: Chain A: E.18, N.101, N.146, D.196 Ligands: XYP.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.18, A:D.196, H2O.3, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paakkonen, J. et al., Three-dimensional structure of xylonolactonase from Caulobacter crescentus: A mononuclear iron enzyme of the 6-bladed beta-propeller hydrolase family. Protein Sci. (2022)

Release Date

2021-11-24

Peptides

Smp-30/Cgr1 family protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Smp-30/Cgr1 family protein

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