- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-dimer
- Ligands
- 6 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
TPP.4: 23 residues within 4Å:- Chain A: Y.28, P.29, I.30, E.64, Q.88, L.92, E.817, T.838, G.839, C.840, F.869, G.962, D.963, G.964, W.965, I.969, T.991, V.993, Y.994, S.995, N.996, T.997
- Ligands: MG.6
21 PLIP interactions:21 interactions with chain A- Hydrophobic interactions: A:Y.28, A:I.30, A:L.92, A:F.869, A:F.869, A:I.969, A:Y.994, A:T.997
- Hydrogen bonds: A:E.817, A:C.840, A:G.962, A:D.963, A:G.964, A:W.965, A:T.991, A:S.995, A:N.996
- Water bridges: A:T.838, A:T.838, A:T.991
- pi-Stacking: A:F.869
TPP.10: 23 residues within 4Å:- Chain B: Y.28, P.29, I.30, E.64, Q.88, L.92, E.817, T.838, G.839, C.840, F.869, G.962, D.963, G.964, W.965, I.969, T.991, V.993, Y.994, S.995, N.996, T.997
- Ligands: MG.12
21 PLIP interactions:21 interactions with chain B- Hydrophobic interactions: B:Y.28, B:I.30, B:L.92, B:F.869, B:F.869, B:I.969, B:Y.994, B:T.997
- Hydrogen bonds: B:E.817, B:C.840, B:G.962, B:D.963, B:G.964, B:W.965, B:T.991, B:S.995, B:N.996
- Water bridges: B:T.838, B:T.838, B:T.991
- pi-Stacking: B:F.869
- 2 x CA: CALCIUM ION(Non-covalent)
CA.5: 5 residues within 4Å:- Chain A: D.983, N.985, A.1056, F.1059, G.1061
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:D.983, A:F.1059, A:G.1061
CA.11: 5 residues within 4Å:- Chain B: D.983, N.985, A.1056, F.1059, G.1061
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:D.983, B:F.1059, B:G.1061
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.6: 5 residues within 4Å:- Chain A: D.963, T.991, V.993, S.995
- Ligands: TPP.4
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.963, A:D.963, A:T.991, A:V.993
MG.12: 5 residues within 4Å:- Chain B: D.963, T.991, V.993, S.995
- Ligands: TPP.10
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:D.963, B:D.963, B:T.991, B:V.993
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cherrier, M.V. et al., Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy. Biomolecules (2022)
- Release Date
- 2022-03-23
- Peptides
- Pyruvate:ferredoxin oxidoreductase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-dimer
- Ligands
- 6 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x TPP: THIAMINE DIPHOSPHATE(Non-covalent)
- 2 x CA: CALCIUM ION(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cherrier, M.V. et al., Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy. Biomolecules (2022)
- Release Date
- 2022-03-23
- Peptides
- Pyruvate:ferredoxin oxidoreductase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B