SMTL ID : 7pos.1

PI3 kinase delta in complex with 5-(3,6-dihydro-2H-pyran-4-yl)-2-methoxy-N-(5-{3-[4-(propan-2-yl)piperazin-1-yl]prop-1-yn-1-yl}pyridin-3-yl)pyridine-3-sulfonamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

monomer

Ligands

1 x 7XN: 5-(3,6-dihydro-2~{H}-pyran-4-yl)-2-methoxy-~{N}-[5-[3-(4-propan-2-ylpiperazin-1-yl)prop-1-ynyl]pyridin-3-yl]pyridine-3-sulfonamide(Non-covalent)

7XN.1: 19 residues within 4Å: Chain A: T.646, M.648, P.654, W.656, I.673, K.675, Y.709, I.721, E.722, V.723, V.724, S.727, D.728, T.729, D.793, M.796, F.804, I.806, D.807 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:T.646, A:W.656, A:W.656, A:I.673, A:Y.709, A:I.721, A:T.729 Hydrogen bonds: A:K.675, A:V.724 Water bridges: A:Y.709 Salt bridges: A:D.728 pi-Cation interactions: A:W.656

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Down, K. et al., Discovery of GSK251: A Highly Potent, Highly Selective, Orally Bioavailable Inhibitor of PI3K delta with a Novel Binding Mode. J.Med.Chem. (2021)

Release Date

2021-09-29

Peptides

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform

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