SMTL ID : 7pqs.1 (1 other biounit)

SRPK1 in complex with MSC2711186

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 80H: ~{N}-[3-[[[2-(6-chloranyl-7-fluoranyl-1~{H}-benzimidazol-2-yl)pyrimidin-4-yl]amino]methyl]pyridin-2-yl]-~{N}-methyl-methanesulfonamide(Non-covalent)

80H.1: 21 residues within 4Å: Chain A: L.31, G.32, W.33, G.34, V.39, A.52, F.110, E.111, V.112, L.113, G.114, H.115, H.116, K.119, E.162, L.165, V.168, Y.172, L.176, A.224 Ligands: CL.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.31, A:F.110, A:L.165, A:L.165, A:A.224 Hydrogen bonds: A:L.113, A:G.114 Water bridges: A:K.54 Halogen bonds: A:Y.172

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: D.239, I.240, Q.241, R.246 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.239, A:R.246 Water bridges: A:Q.241

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: F.110, A.224, D.225 Ligands: 80H.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schroeder, M. et al., SRPK1 in complex with MSC2711186. To Be Published

Release Date

2021-12-15

Peptides

SRSF protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SRSF protein kinase 1

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