SMTL ID : 7pw1.1

Crystal structure of ancestral haloalkane dehalogenase AncLinB-DmbA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: N.35, W.106, F.166, W.204, P.205, I.208 Ligand excluded by PLIP

4 x NA: SODIUM ION(Non-functional Binders)

NA.2: 6 residues within 4Å: Chain A: V.30, F.31, Q.32, A.57, C.58, W.90 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.56, A:C.58 NA.3: 7 residues within 4Å: Chain A: F.31, Q.32, H.33, S.39, W.42, A.57, C.58 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.33, A:W.42, A:C.58 NA.4: 4 residues within 4Å: Chain A: L.60, I.61, H.82, Y.85 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.61, A:L.86 NA.5: 5 residues within 4Å: Chain A: Y.77, H.82, P.200, S.203, W.204 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.82, A:W.204

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 4 residues within 4Å: Chain A: F.148, V.170, A.174, H.269 3 PLIP interactions: 3 interactions with chain A Water bridges: A:D.105, A:V.170, A:G.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mazur, A. et al., Structural Analysis of the Ancestral Haloalkane Dehalogenase AncLinB-DmbA. Int J Mol Sci (2021)

Release Date

2022-04-06

Peptides

Haloalkane dehalogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Haloalkane dehalogenase