- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
- Ligands
- 266 x K: POTASSIUM ION(Non-covalent)(Non-functional Binders)
- 37 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
MG.9: 1 residues within 4Å:- Chain C: R.3
No protein-ligand interaction detected (PLIP)MG.15: 1 residues within 4Å:- Chain T: R.101
No protein-ligand interaction detected (PLIP)MG.265: 2 residues within 4Å:- Chain 1: A.80, G.315
No protein-ligand interaction detected (PLIP)MG.266: 3 residues within 4Å:- Chain 1: U.741, A.742
- Ligands: MG.267
No protein-ligand interaction detected (PLIP)MG.267: 4 residues within 4Å:- Chain 1: G.743, G.763
- Ligands: K.54, MG.266
No protein-ligand interaction detected (PLIP)MG.268: 2 residues within 4Å:- Chain 1: U.307
- Chain 4: N.95
1 PLIP interactions:1 interactions with chain 4- Metal complexes: 4:N.95
MG.269: 3 residues within 4Å:- Chain 1: G.860, G.861
- Ligands: MG.270
No protein-ligand interaction detected (PLIP)MG.270: 2 residues within 4Å:- Ligands: K.104, MG.269
No protein-ligand interaction detected (PLIP)MG.271: 1 residues within 4Å:- Chain 1: A.257
No protein-ligand interaction detected (PLIP)MG.272: 4 residues within 4Å:- Chain 1: A.778, A.779, C.780
- Ligands: MG.289
No protein-ligand interaction detected (PLIP)MG.273: 4 residues within 4Å:- Chain 1: U.848, G.849
- Chain F: N.20
- Ligands: K.119
No protein-ligand interaction detected (PLIP)MG.274: 2 residues within 4Å:- Chain 1: C.818, G.819
No protein-ligand interaction detected (PLIP)MG.275: 7 residues within 4Å:- Chain 1: C.686, C.687, G.688, C.817, C.818
- Chain N: Y.13
- Ligands: MG.276
No protein-ligand interaction detected (PLIP)MG.276: 8 residues within 4Å:- Chain 1: C.686, C.687, G.688, G.795, C.796, G.816, C.817
- Ligands: MG.275
No protein-ligand interaction detected (PLIP)MG.277: 7 residues within 4Å:- Chain 1: U.12, C.13, C.884, A.885, G.1039
- Ligands: K.177, K.178
No protein-ligand interaction detected (PLIP)MG.278: 5 residues within 4Å:- Chain 1: G.346, G.347, A.348
- Chain F: R.48
- Ligands: K.199
No protein-ligand interaction detected (PLIP)MG.279: 3 residues within 4Å:- Chain 1: A.42, U.85
- Ligands: K.213
No protein-ligand interaction detected (PLIP)MG.280: 3 residues within 4Å:- Chain 1: G.274, G.275, G.289
No protein-ligand interaction detected (PLIP)MG.281: 4 residues within 4Å:- Chain 1: C.487, G.488, U.490
- Ligands: K.36
No protein-ligand interaction detected (PLIP)MG.282: 3 residues within 4Å:- Chain 1: G.383, G.384, C.548
No protein-ligand interaction detected (PLIP)MG.283: 4 residues within 4Å:- Chain 1: C.1339, G.1340, G.1398
- Ligands: K.243
No protein-ligand interaction detected (PLIP)MG.284: 4 residues within 4Å:- Chain 1: G.298, A.313
- Chain T: K.23, R.25
No protein-ligand interaction detected (PLIP)MG.285: 2 residues within 4Å:- Chain 1: G.726, C.727
No protein-ligand interaction detected (PLIP)MG.286: 2 residues within 4Å:- Chain 1: A.313, C.314
No protein-ligand interaction detected (PLIP)MG.287: 5 residues within 4Å:- Chain 1: C.945, C.946, U.947, G.1159, C.1160
No protein-ligand interaction detected (PLIP)MG.288: 4 residues within 4Å:- Chain 1: G.627, G.629
- Ligands: K.106, K.107
No protein-ligand interaction detected (PLIP)MG.289: 3 residues within 4Å:- Chain 1: C.504, C.780
- Ligands: MG.272
No protein-ligand interaction detected (PLIP)MG.290: 1 residues within 4Å:- Chain 1: A.777
No protein-ligand interaction detected (PLIP)MG.291: 3 residues within 4Å:- Chain 1: A.719, U.720
- Chain C: M.4
No protein-ligand interaction detected (PLIP)MG.292: 6 residues within 4Å:- Chain 1: G.709, C.710
- Chain M: H.60, K.61
- Ligands: K.13, MG.293
No protein-ligand interaction detected (PLIP)MG.293: 6 residues within 4Å:- Chain 1: G.709, C.710
- Chain C: S.12, R.13
- Chain M: K.61
- Ligands: MG.292
No protein-ligand interaction detected (PLIP)MG.294: 5 residues within 4Å:- Chain 1: A.1416, G.1421, A.1423, U.1424
- Ligands: K.29
No protein-ligand interaction detected (PLIP)MG.295: 3 residues within 4Å:- Chain 1: U.292
- Ligands: K.71, K.215
No protein-ligand interaction detected (PLIP)MG.296: 1 residues within 4Å:- Chain 1: G.82
No protein-ligand interaction detected (PLIP)MG.297: 2 residues within 4Å:- Chain 1: C.727, G.775
No protein-ligand interaction detected (PLIP)MG.298: 3 residues within 4Å:- Chain 1: G.289, A.290, C.291
No protein-ligand interaction detected (PLIP)MG.299: 5 residues within 4Å:- Chain 1: U.1414, A.1415, A.1416, G.1420, G.1421
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hiregange, D.G. et al., Cryo-EM structure of the ancient eukaryotic ribosome from the human parasite Giardia lamblia. Nucleic Acids Res. (2022)
- Release Date
- 2022-05-25
- Peptides
- Ribosomal protein S29A: A
Ribosomal protein S19e: B
Ribosomal protein S13: C
Ribosomal protein S9: D
Ribosomal protein S3: E
Ribosomal protein S23: F
Ribosomal protein S18: G
Ribosomal protein S16: H
Ribosomal protein S2: I
40S ribosomal protein SA: J
40S ribosomal protein S3a: K
Ribosomal protein S24: L
Ribosomal protein S27: M
40S ribosomal protein S26: N
40S ribosomal protein S25: O
40S ribosomal protein S21: P
Ribosomal protein S15: Q
Ribosomal protein S17: R
Ribosomal protein S10B: S
40S ribosomal protein S8: T
40S ribosomal protein S30: U
Ribosomal protein eS7: V
Ribosomal protein eL41: W
Ribosomal protein S28: X
Ribosomal protein S14: Y
Ribosomal protein S15A: Z
40S ribosomal protein S4: 0
SSU ribosomal protein S17P: 2
Ribosomal protein S20: 3
40S ribosomal protein S6: 4
Ribosomal protein S5: 5 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
dB
TC
ND
JE
DF
XG
SH
QI
CJ
AK
BL
YM
bN
aO
ZP
VQ
PR
RS
KT
IU
eV
HW
nX
cY
OZ
W0
E2
L3
U4
G5
F
SMTL ID : 7pwf.1
Cryo-EM structure of small subunit of Giardia lamblia ribosome at 2.9 A resolution
Ribosomal protein S29A
Ribosomal protein S19e
Ribosomal protein S13
Ribosomal protein S9
Ribosomal protein S3
Ribosomal protein S23
Ribosomal protein S18
Ribosomal protein S16
Ribosomal protein S2
40S ribosomal protein SA
40S ribosomal protein S3a
Ribosomal protein S24
Ribosomal protein S27
40S ribosomal protein S26
40S ribosomal protein S25
40S ribosomal protein S21
Ribosomal protein S15
Ribosomal protein S17
Ribosomal protein S10B
40S ribosomal protein S8
40S ribosomal protein S30
Ribosomal protein eS7
Ribosomal protein eL41
Ribosomal protein S28
Ribosomal protein S14
Ribosomal protein S15A
40S ribosomal protein S4
SSU ribosomal protein S17P
Ribosomal protein S20
40S ribosomal protein S6
Ribosomal protein S5
Related Entries With Identical Sequence
7pwo.1 | 7pwo.2 | 7pwo.3 | 7pwo.4 | 7pwo.5 | 7pwo.6 | 7pwo.7 | 7pwo.8 | 7pwo.9 | 7pwo.10 | 7pwo.11 | 7pwo.12 | 7pwo.13 | 7pwo.14 | 7pwo.15 | 7pwo.16 | 7pwo.17 | 7pwo.18 | 7pwo.19 | 7pwo.20 | 7pwo.21 | 7pwo.22 | 7pwo.23 | 7pwo.24 | 7pwo.64 | 7pwo.65 | 7pwo.66 | 7pwo.67 | 7pwo.68 | 8br8.42 more...less...8br8.43 | 8br8.44 | 8br8.45 | 8br8.46 | 8br8.47 | 8br8.48 | 8br8.49 | 8br8.50 | 8br8.51 | 8br8.52 | 8br8.53 | 8br8.55 | 8br8.56 | 8br8.57 | 8br8.58 | 8br8.59 | 8br8.61 | 8br8.62 | 8br8.63 | 8br8.64 | 8br8.65 | 8br8.66 | 8br8.67 | 8br8.69 | 8br8.71 | 8brm.42 | 8brm.43 | 8brm.44 | 8brm.45 | 8brm.46 | 8brm.47 | 8brm.48 | 8brm.49 | 8brm.50 | 8brm.51 | 8brm.52 | 8brm.53 | 8brm.55 | 8brm.56 | 8brm.57 | 8brm.58 | 8brm.59 | 8brm.61 | 8brm.62 | 8brm.63 | 8brm.64 | 8brm.65 | 8brm.66 | 8brm.67 | 8brm.69 | 8brm.71 | 8bsi.42 | 8bsi.43 | 8bsi.44 | 8bsi.45 | 8bsi.46 | 8bsi.47 | 8bsi.48 | 8bsi.49 | 8bsi.50 | 8bsi.51 | 8bsi.52 | 8bsi.53 | 8bsi.55 | 8bsi.56 | 8bsi.57 | 8bsi.58 | 8bsi.59 | 8bsi.61 | 8bsi.62 | 8bsi.63 | 8bsi.64 | 8bsi.65 | 8bsi.66 | 8bsi.67 | 8bsi.69 | 8bsi.71 | 8bsj.42 | 8bsj.43 | 8bsj.44 | 8bsj.45 | 8bsj.46 | 8bsj.47 | 8bsj.48 | 8bsj.49 | 8bsj.50 | 8bsj.51 | 8bsj.52 | 8bsj.53 | 8bsj.55 | 8bsj.56 | 8bsj.57 | 8bsj.58 | 8bsj.59 | 8bsj.60 | 8bsj.61 | 8bsj.62 | 8bsj.63 | 8bsj.64 | 8bsj.65 | 8bsj.66 | 8bsj.67 | 8bsj.69 | 8bsj.71 | 8btd.42 | 8btd.43 | 8btd.44 | 8btd.45 | 8btd.46 | 8btd.47 | 8btd.48 | 8btd.49 | 8btd.50 | 8btd.51 | 8btd.52 | 8btd.53 | 8btd.58 | 8btd.59 | 8btd.61 | 8btd.62 | 8btd.63 | 8btd.64 | 8btd.65 | 8btd.66 | 8btd.67 | 8btd.69 | 8btd.71 | 8btr.42 | 8btr.43 | 8btr.44 | 8btr.45 | 8btr.46 | 8btr.47 | 8btr.48 | 8btr.49 | 8btr.50 | 8btr.51 | 8btr.52 | 8btr.53 | 8btr.58 | 8btr.59 | 8btr.61 | 8btr.62 | 8btr.63 | 8btr.64 | 8btr.65 | 8btr.66 | 8btr.67 | 8btr.69 | 8btr.71 | 8fvy.1 | 8g4s.1