SMTL ID : 7q2c.1

mycolic acid methyltransferase Hma (MmaA4) from Mycobac-terium tuberculosis in complex with ZT260

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 9 residues within 4Å: Chain A: I.97, G.98, L.119, T.120, L.121, Q.147, G.148, W.149, A.164 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.149 DMS.2: 6 residues within 4Å: Chain A: Y.42, D.43, V.44, F.49, I.225 Ligands: DMS.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.288 DMS.3: 5 residues within 4Å: Chain A: D.46, F.49, Q.53, Y.59 Ligands: DMS.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.53 Salt bridges: A:D.46 pi-Cation interactions: A:F.49

2 x 3AV: 6-methyl-2H-chromen-2-one(Non-covalent)

3AV.4: 10 residues within 4Å: Chain A: E.166, H.167, S.195, I.221, F.226, G.229, L.231, Y.291, C.295, F.299 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:E.166, A:E.166, A:I.221, A:I.221, A:F.226, A:L.231, A:L.231 Hydrogen bonds: A:S.195 pi-Stacking: A:F.226 3AV.5: 5 residues within 4Å: Chain A: P.55, T.56, R.57, W.101, R.128 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:R.57, A:W.101, A:W.101 Salt bridges: A:R.128 pi-Stacking: A:W.101 pi-Cation interactions: A:R.57, A:R.128, A:R.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Galy, R. et al., Fragment-Based Ligand Discovery Applied to the Mycolic Acid Methyltransferase Hma (MmaA4) from Mycobacterium tuberculosis : A Crystallographic and Molecular Modelling Study. Pharmaceuticals (2021)

Release Date

2022-02-02

Peptides

Hydroxymycolate synthase MmaA4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hydroxymycolate synthase MmaA4

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