- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-hexamer
- Ligands
- 3 x K: POTASSIUM ION(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 5 residues within 4Å:- Chain A: R.175
- Chain C: R.175
- Chain E: R.175
- Ligands: SO4.8, SO4.14
4 PLIP interactions:2 interactions with chain A, 1 interactions with chain E, 1 interactions with chain C- Water bridges: A:R.175
- Salt bridges: A:R.175, E:R.175, C:R.175
SO4.3: 5 residues within 4Å:- Chain A: R.27, R.88, G.90, T.91
- Chain B: R.45
14 PLIP interactions:11 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:T.91
- Water bridges: A:G.23, A:R.27, A:R.27, A:R.88, A:R.88, A:R.88, A:E.195, A:E.195, B:R.45, B:R.45
- Salt bridges: A:R.27, A:R.88, B:R.45
SO4.4: 5 residues within 4Å:- Chain B: R.175
- Chain D: R.175
- Chain F: R.175
- Ligands: SO4.10, SO4.16
5 PLIP interactions:1 interactions with chain F, 1 interactions with chain B, 3 interactions with chain D- Salt bridges: F:R.175, B:R.175, D:R.175
- Water bridges: D:R.175, D:R.175
SO4.5: 5 residues within 4Å:- Chain A: R.45
- Chain B: G.23, R.27, G.90, T.91
8 PLIP interactions:6 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:G.23, B:T.91
- Water bridges: B:R.27, B:R.27, B:R.88, A:R.45
- Salt bridges: B:R.27, A:R.45
SO4.8: 5 residues within 4Å:- Chain A: R.175
- Chain C: R.175
- Chain E: R.175
- Ligands: SO4.2, SO4.14
4 PLIP interactions:1 interactions with chain A, 1 interactions with chain E, 2 interactions with chain C- Salt bridges: A:R.175, E:R.175, C:R.175
- Water bridges: C:R.175
SO4.9: 5 residues within 4Å:- Chain C: R.27, R.88, G.90, T.91
- Chain D: R.45
14 PLIP interactions:11 interactions with chain C, 3 interactions with chain D- Hydrogen bonds: C:T.91
- Water bridges: C:G.23, C:R.27, C:R.27, C:R.88, C:R.88, C:R.88, C:E.195, C:E.195, D:R.45, D:R.45
- Salt bridges: C:R.27, C:R.88, D:R.45
SO4.10: 5 residues within 4Å:- Chain B: R.175
- Chain D: R.175
- Chain F: R.175
- Ligands: SO4.4, SO4.16
5 PLIP interactions:3 interactions with chain F, 1 interactions with chain B, 1 interactions with chain D- Water bridges: F:R.175, F:R.175
- Salt bridges: F:R.175, B:R.175, D:R.175
SO4.11: 5 residues within 4Å:- Chain C: R.45
- Chain D: G.23, R.27, G.90, T.91
8 PLIP interactions:2 interactions with chain C, 6 interactions with chain D- Water bridges: C:R.45, D:R.27, D:R.27, D:R.88
- Salt bridges: C:R.45, D:R.27
- Hydrogen bonds: D:G.23, D:T.91
SO4.14: 5 residues within 4Å:- Chain A: R.175
- Chain C: R.175
- Chain E: R.175
- Ligands: SO4.2, SO4.8
4 PLIP interactions:1 interactions with chain A, 2 interactions with chain E, 1 interactions with chain C- Salt bridges: A:R.175, E:R.175, C:R.175
- Water bridges: E:R.175
SO4.15: 5 residues within 4Å:- Chain E: R.27, R.88, G.90, T.91
- Chain F: R.45
14 PLIP interactions:11 interactions with chain E, 3 interactions with chain F- Hydrogen bonds: E:T.91
- Water bridges: E:G.23, E:R.27, E:R.27, E:R.88, E:R.88, E:R.88, E:E.195, E:E.195, F:R.45, F:R.45
- Salt bridges: E:R.27, E:R.88, F:R.45
SO4.16: 5 residues within 4Å:- Chain B: R.175
- Chain D: R.175
- Chain F: R.175
- Ligands: SO4.4, SO4.10
5 PLIP interactions:1 interactions with chain D, 3 interactions with chain B, 1 interactions with chain F- Salt bridges: D:R.175, B:R.175, F:R.175
- Water bridges: B:R.175, B:R.175
SO4.17: 5 residues within 4Å:- Chain E: R.45
- Chain F: G.23, R.27, G.90, T.91
8 PLIP interactions:2 interactions with chain E, 6 interactions with chain F- Water bridges: E:R.45, F:R.27, F:R.27, F:R.88
- Salt bridges: E:R.45, F:R.27
- Hydrogen bonds: F:G.23, F:T.91
- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 4 residues within 4Å:- Chain A: F.4
- Chain B: F.159, R.165, D.167
5 PLIP interactions:5 interactions with chain B- Water bridges: B:Y.160, B:R.165, B:R.165, B:R.165, B:D.167
GOL.12: 4 residues within 4Å:- Chain C: F.4
- Chain D: F.159, R.165, D.167
5 PLIP interactions:5 interactions with chain D- Water bridges: D:Y.160, D:R.165, D:R.165, D:R.165, D:D.167
GOL.18: 4 residues within 4Å:- Chain E: F.4
- Chain F: F.159, R.165, D.167
5 PLIP interactions:5 interactions with chain F- Water bridges: F:Y.160, F:R.165, F:R.165, F:R.165, F:D.167
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Polyakov, K. et al., Mutant D24G of uridine phosphorylase from E. coli. To Be Published
- Release Date
- 2022-04-06
- Peptides
- Uridine phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AAAB
BBBC
AAAD
BBBE
AAAF
BBB
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-hexamer
- Ligands
- 3 x K: POTASSIUM ION(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Polyakov, K. et al., Mutant D24G of uridine phosphorylase from E. coli. To Be Published
- Release Date
- 2022-04-06
- Peptides
- Uridine phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AAAB
BBBC
AAAD
BBBE
AAAF
BBB