SMTL ID : 7q52.1

Crystal structure of S/T protein kinase PknG from Mycobacterium tuberculosis in complex with inhibitor L2W

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x FE: FE (III) ION(Non-covalent)

FE.1: 4 residues within 4Å: Chain A: C.34, C.37, C.56, C.59 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.34, A:C.37, A:C.56, A:C.59

1 x 8ZC: 2-azanyl-3-(4-fluorophenyl)carbonyl-indolizine-1-carboxamide(Non-covalent)

8ZC.2: 12 residues within 4Å: Chain A: I.85, A.86, I.93, V.107, V.139, M.160, E.161, Y.162, V.163, G.165, M.211, I.220 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.85, A:A.86, A:I.93 Hydrogen bonds: A:E.161, A:V.163, A:V.163

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 3 residues within 4Å: Chain A: D.204, K.206, D.221 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.206, A:D.221 Water bridges: A:D.204 NA.4: 4 residues within 4Å: Chain A: N.203, T.251, T.254, D.255 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.254, A:D.255, A:D.255

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burastero, O. et al., Cosolvent Sites-Based Discovery of Mycobacterium Tuberculosis Protein Kinase G Inhibitors. J.Med.Chem. (2022)

Release Date

2022-06-22

Peptides

Serine/threonine-protein kinase PknG: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Serine/threonine-protein kinase PknG