SMTL ID : 7q63.1 (2 other biounits)

The tandem SH2 domains of SYK

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 5 residues within 4Å: Chain A: R.18, R.38, H.59, Y.60, T.61 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.18, A:R.18, A:R.38 Water bridges: A:H.59, A:T.61, A:T.61

3 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.2: 5 residues within 4Å: Chain A: R.171, K.208, V.209, L.210, H.211 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.208 SCN.3: 5 residues within 4Å: Chain A: R.193, A.200, H.211, Y.212, R.213 No protein-ligand interaction detected (PLIP) SCN.4: 6 residues within 4Å: Chain A: M.2, S.5, L.9, S.80, P.81, A.82 No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 2 residues within 4Å: Chain A: R.18, R.41 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bradshaw, W.J. et al., The mechanism of allosteric activation of SYK kinase derived from multiple phospho-ITAM-bound structures. Structure (2024)

Release Date

2021-11-24

Peptides

Tyrosine-protein kinase SYK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Tyrosine-protein kinase SYK

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