SMTL ID : 7q8a.2 (1 other biounit)

Crystal structure of tandem domain RRM1-2 of FUBP-interacting repressor (FIR) bound to FUSE ssDNA fragment

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x DG- DT: DNA (5'-D(P*GP*T)-3')(Non-covalent)

DG-DT.1: 12 residues within 4Å: Chain A: Y.21, G.23, S.24, I.25, K.59, G.60, F.61, F.63, R.93, P.94, S.95 Ligands: EDO.5 Protein-ligand interaction information (PLIP) not available

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: R.10, Q.106, L.107, E.110, P.197 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.10, A:E.110 EDO.3: 3 residues within 4Å: Chain A: Q.78, V.82, R.187 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.78, A:R.187, A:R.187 EDO.4: 6 residues within 4Å: Chain A: R.116, S.143, C.144, T.145, F.160, P.195 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.116, A:S.143, A:T.145, A:T.145, A:F.160 EDO.5: 6 residues within 4Å: Chain A: I.25, Y.27, H.58, K.59, G.60 Ligands: DG-DT.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ni, X. et al., Crystal structure of tandem domain RRM1-2 of FIR bound to FUSE ssDNA fragment. To Be Published

Release Date

2022-11-09

Peptides

Poly(U)-binding-splicing factor PUF60: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Poly(U)-binding-splicing factor PUF60

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