SMTL ID : 7q8w.1

Crystal structure of TTBK1 in complex with VNG1.35 (compound 23)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

monomer

Ligands

1 x 9IO: ~{N}-(4-methoxyphenyl)-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine(Non-covalent)

9IO.1: 12 residues within 4Å: Chain A: I.29, I.37, A.50, K.52, C.80, M.96, Q.97, L.98, Q.99, N.102, S.147, L.164 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.37, A:L.164, A:L.164 Hydrogen bonds: A:Q.97, A:Q.99, A:N.102

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 3 residues within 4Å: Chain A: R.142, R.183, R.189 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.142, A:R.183, A:R.189

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: L.73, Q.74, G.75, K.76, V.79, R.81 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.73, A:G.75 Water bridges: A:R.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nozal, V. et al., TDP-43 Modulation by Tau-Tubulin Kinase 1 Inhibitors: A New Avenue for Future Amyotrophic Lateral Sclerosis Therapy. J.Med.Chem. (2022)

Release Date

2022-03-09

Peptides

Tau-tubulin kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tau-tubulin kinase 1

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