SMTL ID : 7q8y.1 (1 other biounit)

Crystal structure of TTBK2 in complex with VNG2.73 (compound 42)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 3 residues within 4Å: Chain A: R.141, R.182, G.186 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.186 Water bridges: A:K.59, A:K.59, A:R.141, A:R.141, A:R.169, A:R.169, A:R.169 Salt bridges: A:K.59, A:R.141, A:R.182 PO4.2: 5 residues within 4Å: Chain A: N.197, R.202, H.207, D.267, Y.268 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.197, A:N.197, A:Y.268 Water bridges: A:R.202, A:E.203 Salt bridges: A:R.202, A:H.207

1 x 9IV: ~{N}-[4-(2-chloranylphenoxy)phenyl]-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine(Non-covalent)

9IV.3: 14 residues within 4Å: Chain A: I.28, I.36, A.49, K.51, C.79, M.95, Q.96, L.97, Q.98, N.101, A.103, D.104, S.146, L.163 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.36, A:I.36, A:A.103, A:L.163, A:L.163 Hydrogen bonds: A:Q.96, A:Q.98 Water bridges: A:N.101, A:L.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nozal, V. et al., TDP-43 Modulation by Tau-Tubulin Kinase 1 Inhibitors: A New Avenue for Future Amyotrophic Lateral Sclerosis Therapy. J.Med.Chem. (2022)

Release Date

2022-03-09

Peptides

Tau-tubulin kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tau-tubulin kinase 2

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