SMTL ID : 7qc9.1

HisF-C9A-D11E-V33A_L50H_I52H mutant in complex with Ni(II) from T. maritima

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 3 residues within 4Å: Chain A: H.50, H.52, S.144 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.50, A:H.52, A:S.144, H2O.5, H2O.6, H2O.6

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: H.50, G.81, G.82, N.103, T.104 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:G.82, A:N.103, A:T.104 Water bridges: A:G.81, A:I.83, A:N.103, A:T.104, A:T.104, A:T.104, A:A.105, A:A.105, A:Y.143, A:S.144, A:S.144

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: T.119, F.120, G.121 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.119 EDO.4: 4 residues within 4Å: Chain A: R.133, G.136, F.138, E.185 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.133 EDO.5: 4 residues within 4Å: Chain A: E.161, P.192, T.194, T.195 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Beaumet, M. et al., An artificial metalloprotein with metal-adaptive coordination sites and Ni-dependent quercetinase activity. J.Inorg.Biochem. (2022)

Release Date

2022-08-10

Peptides

Imidazole glycerol phosphate synthase subunit HisF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Imidazole glycerol phosphate synthase subunit HisF