SMTL ID : 7qez.1

Crystal structure of the SARS-CoV-2 RBD in complex with the ultrapotent antibody CV2.1169 and CR3022

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.89 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.13 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.13

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain E: S.30, R.31 3 PLIP interactions: 3 interactions with chain E Hydrogen bonds: E:S.30, E:R.31 Salt bridges: E:R.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Planchais, C. et al., Potent human broadly SARS-CoV-2-neutralizing IgA and IgG antibodies effective against Omicron BA.1 and BA.2. J.Exp.Med. (2022)

Release Date

2022-05-18

Peptides

Spike protein S1: A
CR3022 heavy chain: B
CR3022 light chain: C
CV2.1169 IgA heavy chain: D
CV2.1169 light chain: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

C
F

D
H

E
L

Spike protein S1

CR3022 heavy chain

CR3022 light chain

CV2.1169 IgA heavy chain

CV2.1169 light chain

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