SMTL ID : 7qhw.1 (1 other biounit)

TTBK1 kinase domain in complex with inhibitor 29

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x CGI: ~{N}-[4-(4-chloranylphenoxy)phenyl]-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine(Non-covalent)

CGI.1: 13 residues within 4Å: Chain A: I.20, I.28, A.41, M.87, Q.88, L.89, Q.90, G.91, N.93, D.96, R.99, S.138, L.155 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.28, A:L.155, A:L.155 Hydrogen bonds: A:Q.88, A:Q.90

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: F.261, T.262 No protein-ligand interaction detected (PLIP)

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: N.165, R.171, P.172 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.171 GOL.4: 8 residues within 4Å: Chain A: K.51, R.133, A.160, R.161, R.174, A.177, G.178, R.180 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.133, A:R.133, A:R.174 GOL.5: 5 residues within 4Å: Chain A: R.98, R.99, R.184, E.211, G.215 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.98, A:R.184, A:R.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nozal, V. et al., TDP-43 Modulation by Tau-Tubulin Kinase 1 Inhibitors: A New Avenue for Future Amyotrophic Lateral Sclerosis Therapy. J.Med.Chem. (2022)

Release Date

2022-10-26

Peptides

Tau-tubulin kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Tau-tubulin kinase 1

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