SMTL ID : 7qie.2 (1 other biounit)

Crystal Structure of Phosphatidylinositol 5-Phosphate 4-Kinase (PI5P4K2C) bound to an allosteric inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.39 Å

Oligo State

homo-dimer

Ligands

2 x DVF: 5-methyl-2-(2-propan-2-ylphenyl)-~{N}-(pyridin-2-ylmethyl)pyrrolo[3,2-d]pyrimidin-4-amine(Non-covalent)

DVF.1: 16 residues within 4Å: Chain A: D.145, M.146, N.149, L.150, Y.153, P.167, F.169, L.257, L.260, I.262, Y.265, L.314, I.315, D.316, L.318, T.319 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:D.145, A:N.149, A:Y.153, A:Y.153, A:P.167, A:F.169, A:L.260, A:Y.265, A:D.316, A:T.319 Hydrogen bonds: A:D.316 DVF.2: 16 residues within 4Å: Chain B: D.145, M.146, N.149, L.150, Y.153, P.167, F.169, F.256, L.257, L.260, I.262, L.314, I.315, D.316, L.318, T.319 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:D.145, B:N.149, B:Y.153, B:Y.153, B:F.169, B:F.256, B:L.260 Hydrogen bonds: B:D.316, B:D.316

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boffey, H.K. et al., Development of Selective Phosphatidylinositol 5-Phosphate 4-Kinase gamma Inhibitors with a Non-ATP-competitive, Allosteric Binding Mode. J.Med.Chem. (2022)

Release Date

2022-05-18

Peptides

Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma

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