SMTL ID : 7qpr.4 (3 other biounits)

Structure of full length SpoT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: H.54, H.78, D.79, D.143 Ligands: G4P.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.78, A:D.79, A:D.143

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.564, C.565, H.585, C.589 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.564, A:C.565, A:H.585, A:C.589

1 x G4P: GUANOSINE-5',3'-TETRAPHOSPHATE(Non-covalent)

G4P.3: 16 residues within 4Å: Chain A: R.45, K.46, S.110, Q.111, S.112, S.113, K.140, D.143, R.144, N.147, T.150, L.151, L.154, K.158 Ligands: MN.1, MG.4 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:R.45, A:R.45, A:S.110, A:Q.111, A:S.113, A:D.143, A:N.147, A:T.150, A:T.150 Water bridges: A:S.110, A:K.140, A:K.158, A:K.158, A:K.158 Salt bridges: A:K.140, A:K.140, A:R.144, A:K.158, A:K.158 pi-Cation interactions: A:R.45, A:R.45

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 5 residues within 4Å: Chain A: Q.111, S.112, S.113, K.158 Ligands: G4P.3 No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 2 residues within 4Å: Chain A: K.238, R.328 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garcia-Pino, A. et al., Structure of full length SpoT. To Be Published

Release Date

2023-01-18

Peptides

ACT domain protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

ACT domain protein

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