SMTL ID : 7qqy.1

yeast Gid10 bound to Art2 Pro/N-degron

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.26 Å

Oligo State

monomer

Ligands

1 x PRO- PHE- ILE- THR- SER- ARG- PRO- TRP: ECM21(Non-covalent)

PRO-PHE-ILE-THR-SER-ARG-PRO-TRP.1: 19 residues within 4Å: Chain A: Q.29, Y.33, Y.36, F.64, I.66, N.68, L.69, T.70, P.71, E.157, G.179, A.180, S.181, F.182, Y.186, Y.201, C.206, E.207, Q.210 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:Q.29, A:Y.33, A:Y.33, A:Y.36, A:Y.36, A:I.66, A:L.69, A:P.71, A:A.180, A:F.182, A:Y.201, A:E.207, A:Q.210 Hydrogen bonds: A:Q.29, A:L.69, A:E.157, A:G.179, A:G.179, A:G.179, A:S.181, A:S.181, A:Q.210, A:Q.210 Water bridges: A:Y.201

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: P.48, L.49, Y.50, S.53 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Langlois, C.R. et al., A GID E3 ligase assembly ubiquitinates an Rsp5 E3 adaptor and regulates plasma membrane transporters. Embo Rep. (2022)

Release Date

2022-03-09

Peptides

Uncharacterized protein YGR066C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uncharacterized protein YGR066C

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