SMTL ID : 7qst.1

Crystal structure of homing endonuclease-associated PhoVMA intein (C1A)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

monomer

Ligands

2 x CD: CADMIUM ION(Non-covalent)

CD.1: 1 residues within 4Å: Chain A: E.181 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.181, A:E.181 CD.2: 3 residues within 4Å: Chain A: S.1, G.2, E.40 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.40, A:E.40

3 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 3 residues within 4Å: Chain A: C.174, D.175, K.254 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.174 NI.4: 2 residues within 4Å: Chain A: D.127, H.340 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.127, A:D.127, A:H.340 NI.5: 2 residues within 4Å: Chain A: E.108, H.378 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.108, A:E.108, A:H.378, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Beyer, H.M. et al., Structural Basis for the Propagation of Homing Endonuclease-Associated Inteins. Front Mol Biosci (2022)

Release Date

2022-03-30

Peptides

V-type ATP synthase subunit A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

V-type ATP synthase subunit A