SMTL ID : 7qt5.1

Room temperature In-situ SARS-CoV-2 MPRO with bound Z31792168

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

monomer

Ligands

1 x GWS: 2-cyclohexyl-~{N}-pyridin-3-yl-ethanamide(Non-covalent)

GWS.1: 15 residues within 4Å: Chain A: H.41, M.49, F.140, L.141, N.142, S.144, C.145, H.163, H.164, M.165, E.166, H.172, D.187, R.188, Q.189 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:M.49, A:F.140, A:M.165, A:Q.189 Hydrogen bonds: A:E.166

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 8 residues within 4Å: Chain A: M.6, A.7, F.8, S.113, Q.127, D.295, R.298, Q.299 1 PLIP interactions: 1 interactions with chain A pi-Cation interactions: A:F.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gildea, R.J. et al., xia2.multiplex: a multi-crystal data-analysis pipeline. Acta Crystallogr D Struct Biol (2022)

Release Date

2022-05-04

Peptides

3C-like proteinase nsp5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3C-like proteinase nsp5

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