SMTL ID : 7qt6.1

Room temperature In-situ SARS-CoV-2 MPRO with bound Z1367324110

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

monomer

Ligands

1 x RZJ: 1-methyl-3,4-dihydro-2~{H}-quinoline-7-sulfonamide(Non-covalent)

RZJ.1: 13 residues within 4Å: Chain A: H.41, M.49, H.164, M.165, E.166, L.167, P.168, V.186, D.187, R.188, Q.189, T.190, Q.192 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:M.165, A:Q.189 Hydrogen bonds: A:E.166

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 7 residues within 4Å: Chain A: M.6, A.7, F.8, P.9, S.113, Q.127, R.298 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.298 pi-Cation interactions: A:F.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gildea, R.J. et al., xia2.multiplex: a multi-crystal data-analysis pipeline. Acta Crystallogr D Struct Biol (2022)

Release Date

2022-05-04

Peptides

3C-like proteinase nsp5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3C-like proteinase nsp5

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