SMTL ID : 7qul.1

Alcohol Dehydrogenase from Thauera aromatica K319A/K320A mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: A.37, A.149, T.354 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.354 Water bridges: A:A.149 EDO.2: 8 residues within 4Å: Chain A: A.90, V.91, D.156, T.159, T.160, G.303, C.304, Y.309 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:V.91, A:D.156, A:T.159, A:T.160, A:C.304 Water bridges: A:A.90, A:A.90 EDO.5: 3 residues within 4Å: Chain B: A.37, A.149, T.354 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.354, B:T.354 Water bridges: B:A.149 EDO.6: 8 residues within 4Å: Chain B: A.90, V.91, D.156, T.159, T.160, G.303, C.304, Y.309 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:V.91, B:D.156, B:T.159, B:T.159, B:C.304, B:Y.309 Water bridges: B:A.90, B:A.90

4 x ZN: ZINC ION(Non-covalent)

ZN.3: 5 residues within 4Å: Chain A: C.94, G.95, C.97, C.100, C.108 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.94, A:C.97, A:C.100, A:C.108 ZN.4: 5 residues within 4Å: Chain A: C.42, H.65, E.66, D.156, R.350 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.42, A:H.65, A:E.66, A:D.156 ZN.7: 5 residues within 4Å: Chain B: C.94, G.95, C.97, C.100, C.108 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.94, B:C.97, B:C.100, B:C.108 ZN.8: 5 residues within 4Å: Chain B: C.42, H.65, E.66, D.156, R.350 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.42, B:H.65, B:E.66, B:D.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stark, F. et al., Advanced Insights into Catalytic and Structural Features of the Zinc-Dependent Alcohol Dehydrogenase from Thauera aromatica. Chembiochem (2022)

Release Date

2022-08-17

Peptides

6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase